aspsirna3110 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna3110
siRNA Name: R248W-#1
Gene:Tumor protein p53
Disease:Cancer
Wild allele/target (5'->3'): GCAUGAACCGGAGGCCCAU
Mutant allele/target (5'->3'):GCAUGAACUGGAGGCCCAU
Target Mutation: c.944C>T,p.R249W
Wild siRNA (As strand):CGUACUUGGCCUCCGGGUA
ASP-siRNA (As strand):CGUACUUGACCUCCGGGUA
Mutant allele (5'->3'): GCAUGAACUGGAGGCCCAU
ASP-siRNA (As strand):CGUACUUGACCUCCGGGUA
ASP-siRNA efficacy for mutant allele:70
Wild allele (5'->3'): GCAUGAACCGGAGGCCCAU
ASP-siRNA (As strand):CGUACUUGACCUCCGGGUA
ASP-siRNA efficacy for wild allele:40
Percentage discrimination for ASP-siRNA:30
Wild allele (5'->3'): GCAUGAACCGGAGGCCCAU
Wild siRNA (As strand):CGUACUUGGCCUCCGGGUA
Wild allele (5'->3'): GCAUGAACCGGAGGCCCAU
ASP-siRNA (As strand):CGUACUUGACCUCCGGGUA
Concentration:80 nM
Orientation:Sense
Mismatch in:siRNA
UniProt ID: P04637
Target sequence: GCATGAACCGGAGGCCCATCCTCACCATCATCA
Genbank Accesion: NM_000546.5
Cell-line: MG-R248W
Experimental technique used: Western blot
Transfection method: INTERFERin
siRNA expression method: Integrated DNA Technology
Post-transfection duration: 24 hours
OMID ID: 191170
KEGG disease ID:H00881
Reference:26700961

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