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siRNA Id: | aspsirna3116
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siRNA Name: | K6a siRNA 1
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| Gene: | Keratin 6a (KRT6a) |
| Disease: | Pachyonychia congenita (PC) |
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Wild allele/target (5'->3'): | NA
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Mutant allele/target (5'->3'): | GCACAAGUGACUAGUCCUA
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Target Mutation: | NA
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Wild siRNA (As strand): | NA
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ASP-siRNA (As strand): | CGUGUUCACUGAUCAGGAU
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Mutant allele (5'->3'): | GCACAAGUGACUAGUCCUA
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ASP-siRNA (As strand): | CGUGUUCACUGAUCAGGAU
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ASP-siRNA efficacy for mutant allele: | 65
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Wild allele (5'->3'): | NA
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ASP-siRNA (As strand): | CGUGUUCACUGAUCAGGAU
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ASP-siRNA efficacy for wild allele: | 30
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Percentage discrimination for ASP-siRNA: | 35
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Wild allele (5'->3'): | NA
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Wild siRNA (As strand): | NA
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Wild sirna efficacy for wild allele: | 50
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Wild allele (5'->3'): | NA
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ASP-siRNA (As strand): | CGUGUUCACUGAUCAGGAU
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Wild sirna efficacy for mutant allele: | 35
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Percentage discrimination for wild siRNA: | 15
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| Concentration: | 1 nM |
| Orientation: | Sense |
| Mismatch in: | siRNA |
| UniProt ID: | P02538 |
| Target sequence: | CCCTCAACCTGCAAATCGATCCCACCATCC |
| Genbank Accesion: | NM_005554.3 |
| Cell-line: | HaCaT |
| Experimental technique used: | Dual luciferase reporter assay |
| Transfection method: | Lipofectamine 2000 |
| siRNA expression method: | Dharmacon |
| Post-transfection duration: | 48 hours |
| OMID ID: | 167200 |
| KEGG disease ID: | H00684 |
| Reference: | 17762855 |
