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siRNA Id: | aspsirna3178
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siRNA Name: | mi306.12
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| Gene: | Hungtintin (HTT) |
| Disease: | Huntington disease (HD) |
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Wild allele/target (5'->3'): | UUGCCAGGUUACAGCUGCUCUU
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Mutant allele/target (5'->3'): | UUGCCAGGUUGCAGCUGCUCUU
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Target Mutation: | rs362306
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Wild siRNA (As strand): | AACGGUCCAAUGUCGACGAGAA
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ASP-siRNA (As strand): | AACGGUCCAACGUCGACGAGAA
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Mismatch position in siRNA: | C12U |
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Mutant allele (5'->3'): | UUGCCAGGUUGCAGCUGCUCUU
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ASP-siRNA (As strand): | AACGGUCCAACGUCGACGAGAA
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ASP-siRNA efficacy for mutant allele: | 90
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Wild allele (5'->3'): | UUGCCAGGUUACAGCUGCUCUU
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ASP-siRNA (As strand): | AACGGUCCAACGUCGACGAGAA
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ASP-siRNA efficacy for wild allele: | 26
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Percentage discrimination for ASP-siRNA: | 64
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Wild allele (5'->3'): | UUGCCAGGUUACAGCUGCUCUU
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Wild siRNA (As strand): | AACGGUCCAAUGUCGACGAGAA
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Wild sirna efficacy for wild allele: | 45
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Wild allele (5'->3'): | UUGCCAGGUUACAGCUGCUCUU
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ASP-siRNA (As strand): | AACGGUCCAACGUCGACGAGAA
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Wild sirna efficacy for mutant allele: | 57
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Percentage discrimination for wild siRNA: | -12
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| Concentration: | 40 nM |
| Orientation: | Double strand |
| Mismatch in: | siRNA |
| UniProt ID: | P42858 |
| Target sequence: | NA |
| Genbank Accesion: | NM_002111.7 |
| Cell-line: | Transgenic mouse model |
| Experimental technique used: | qRT-PCR |
| Transfection method: | Lipofectamine 2000 |
| siRNA expression method: | Invitrogen |
| Post-transfection duration: | 3 weeks |
| OMID ID: | 143100 |
| KEGG disease ID: | H00059 |
| Reference: | 25849618 |
