aspsirna3179 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna3179
siRNA Name: siSN
Gene:Cyclin-dependent kinase 2 (CDK2)
Disease:NA
Wild allele/target (5'->3'): GAAUUGAAUCACCCGAACA
Mutant allele/target (5'->3'):GAAUUGAAUCACCCGAACA
Target Mutation: NA
Wild siRNA (As strand):CUUAACUUAGUGGGCUUGU
ASP-siRNA (As strand):CUUAACUUAGUGGGCUUGU
Mismatch position in siRNA: NA
Mutant allele (5'->3'): GAAUUGAAUCACCCGAACA
ASP-siRNA (As strand):CUUAACUUAGUGGGCUUGU
ASP-siRNA efficacy for mutant allele:75
Wild allele (5'->3'): GAAUUGAAUCACCCGAACA
ASP-siRNA (As strand):CUUAACUUAGUGGGCUUGU
ASP-siRNA efficacy for wild allele:0
Percentage discrimination for ASP-siRNA:75
Wild allele (5'->3'): GAAUUGAAUCACCCGAACA
Wild siRNA (As strand):CUUAACUUAGUGGGCUUGU
Wild sirna efficacy for wild allele:80
Wild allele (5'->3'): GAAUUGAAUCACCCGAACA
ASP-siRNA (As strand):CUUAACUUAGUGGGCUUGU
Wild sirna efficacy for mutant allele:100
Percentage discrimination for wild siRNA:-20
Concentration:25 nM
Orientation:Double strand
Mismatch in:siRNA
UniProt ID: P24941
Target sequence: NA
Genbank Accesion: NA
Cell-line: hTERT-RPE1
Experimental technique used: qRT-PCR
Transfection method: RNAiMAX
siRNA expression method: Life Technologies
Post-transfection duration: 48 hours
OMID ID: NA
KEGG disease ID:NA
Reference:25586224

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