aspsirna3547 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna3547
siRNA Name: si301
Gene:Microtubule-associated protein tau (MAPT)
Disease:Frontotemporal dementia and parkinsonism linked to chromosome 17 (FTDP-17)
Wild allele/target (5'->3'): NA
Mutant allele/target (5'->3'):ACGUCCUCGGCGGCGGCAGUGUGC
Target Mutation: c.1960G>A,p.Val654Met
Wild siRNA (As strand):NA
ASP-siRNA (As strand):UGCAGGAGCCGCCGCCGUCACACG
Mismatch position in siRNA: NA
Mutant allele (5'->3'): ACGUCCUCGGCGGCGGCAGUGUGC
ASP-siRNA (As strand):UGCAGGAGCCGCCGCCGUCACACG
ASP-siRNA efficacy for mutant allele:80
Wild allele (5'->3'): NA
ASP-siRNA (As strand):UGCAGGAGCCGCCGCCGUCACACG
ASP-siRNA efficacy for wild allele:NA
Percentage discrimination for ASP-siRNA:NA
Wild allele (5'->3'): NA
Wild siRNA (As strand):NA
Wild sirna efficacy for wild allele:49
Wild allele (5'->3'): NA
ASP-siRNA (As strand):UGCAGGAGCCGCCGCCGUCACACG
Wild sirna efficacy for mutant allele:20
Percentage discrimination for wild siRNA:29
Concentration:2.5mg
Orientation:Sense
Mismatch in:nil
UniProt ID: P10636
Target sequence: GUGGCCAGGUGGAAGUAAAAUC
Genbank Accesion: NM_016835.4
Cell-line: Cos-7
Experimental technique used: Western blot
Transfection method: Lipofectamine Plus
siRNA expression method: Integrated DNA Technologies
Post-transfection duration: 24 hours
OMID ID: 600274
KEGG disease ID:H00078
Reference:US20080176812A1

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