aspsirna3573 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna3573
siRNA Name: A11
Gene:Activin A type I receptor proteins (ACVR1)
Disease:Fibrodysplasia Ossificans Progressiva (FOP)
Wild allele/target (5'->3'): ACAGUGGCUCGCCAGAUUA
Mutant allele/target (5'->3'):ACAGUGGCUCACCAGAUUA
Target Mutation: c.617G>A,p.Arg206His
Wild siRNA (As strand):UGUCACCGAGCGGUCUAAU
ASP-siRNA (As strand):UGUCACCGAGUGGUCUAAU
Mismatch position in siRNA: U9C
Mutant allele (5'->3'): ACAGUGGCUCACCAGAUUA
ASP-siRNA (As strand):UGUCACCGAGUGGUCUAAU
ASP-siRNA efficacy for mutant allele:50
Wild allele (5'->3'): ACAGUGGCUCGCCAGAUUA
ASP-siRNA (As strand):UGUCACCGAGUGGUCUAAU
ASP-siRNA efficacy for wild allele:20
Percentage discrimination for ASP-siRNA:30
Wild allele (5'->3'): ACAGUGGCUCGCCAGAUUA
Wild siRNA (As strand):UGUCACCGAGCGGUCUAAU
Wild sirna efficacy for wild allele:45
Wild allele (5'->3'): ACAGUGGCUCGCCAGAUUA
ASP-siRNA (As strand):UGUCACCGAGUGGUCUAAU
Wild sirna efficacy for mutant allele:40
Percentage discrimination for wild siRNA:5
Concentration:10nM
Orientation:Double strand
Mismatch in:siRNA
UniProt ID:
Target sequence: AACAGTGGCTCGCCAGATTACACTGTTGGAGT
Cell-line: FOP SHED cells
Experimental technique used: Immunopblotting
Transfection method: Lipofectamine 2000
siRNA expression method: Invitrogen
Post-transfection duration: 48 hours
OMID ID: 135100
KEGG disease ID:H00430
Reference:US8859752B2

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