aspsirna3782 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna3782
siRNA Name: 206
Gene:Peptidylprolyl isomerase B (PPIB)/Cyclophilin B
Disease:PPIB-Related Osteogenesis Imperfecta (Type IX)
Wild allele/target (5'->3'): NA
Mutant allele/target (5'->3'):AAAGUUGCGCGGAGGAGUU
Target Mutation: NA
Wild siRNA (As strand):NA
ASP-siRNA (As strand):UUUCAACGCGCCUCCUCAA
Mismatch position in siRNA: NA
Mutant allele (5'->3'): AAAGUUGCGCGGAGGAGUU
ASP-siRNA (As strand):UUUCAACGCGCCUCCUCAA
ASP-siRNA efficacy for mutant allele:90
Wild allele (5'->3'): NA
ASP-siRNA (As strand):UUUCAACGCGCCUCCUCAA
ASP-siRNA efficacy for wild allele:NA
Percentage discrimination for ASP-siRNA:NA
Wild allele (5'->3'): NA
Wild siRNA (As strand):NA
Wild sirna efficacy for wild allele:NA
Wild allele (5'->3'): NA
ASP-siRNA (As strand):UUUCAACGCGCCUCCUCAA
Wild sirna efficacy for mutant allele:NA
Percentage discrimination for wild siRNA:NA
Concentration:100nM
Orientation:Double strand
Mismatch in:siRNA
UniProt ID: P23284
Target sequence: CGCAGGCAAAGACACCAACGGCTCCCAGTTCTTCAT
Genbank Accesion: NM_000942.4
Cell-line: HeLa
Experimental technique used: Dual luciferase reporter assay
Transfection method: Lipofectamine 2000
siRNA expression method: 2' ACE-chemistry
Post-transfection duration: 24 hours
OMID ID: 166200
KEGG disease ID:H00506
Reference:16489337

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