aspsirna3906 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna3906
siRNA Name: siRNA-10_17A
Gene:Leukotriene B4 receptor (LTB4R)
Disease:NA
Wild allele/target (5'->3'): NA
Mutant allele/target (5'->3'):GCUUUGUCGUGUGGAGCAU
Target Mutation: NA
Wild siRNA (As strand):NA
ASP-siRNA (As strand):CGAAACAGCACACCUCGUA
Mismatch position in siRNA: A:U pair
Mutant allele (5'->3'): GCUUUGUCGUGUGGAGCAU
ASP-siRNA (As strand):CGAAACAGCACACCUCGUA
ASP-siRNA efficacy for mutant allele:87
Wild allele (5'->3'): NA
ASP-siRNA (As strand):CGAAACAGCACACCUCGUA
ASP-siRNA efficacy for wild allele:NA
Percentage discrimination for ASP-siRNA:NA
Wild allele (5'->3'): NA
Wild siRNA (As strand):NA
Wild sirna efficacy for wild allele:87
Wild allele (5'->3'): NA
ASP-siRNA (As strand):CGAAACAGCACACCUCGUA
Wild sirna efficacy for mutant allele:58
Percentage discrimination for wild siRNA:29
Concentration:13nM
Orientation:Sense
Mismatch in:siRNA
UniProt ID: O88855
Target sequence: AGCUAAUUGGAGAGAGCACGAUA
Genbank Accesion: NM_021656.1
Cell-line: HEK293
Experimental technique used: RT-PCR, Flourescence microscopy
Transfection method: TriZol reagent
siRNA expression method: Genepharma, Proligo Sigma
Post-transfection duration: 24 hours
OMID ID: NA
KEGG disease ID:NA
Reference:19815667

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