| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Gene | Start | Alignment | End | % Identity |
| Query | 1 | aaatactcctagcgagact | 19 | ||
| ENST00000447579 | GRCh37:16:67242293:67260691:-1 | 827 | ...........ca...... | 809 | 89 |
| ENST00000574160 | GRCh37:HSCHR21 | 122 | ....ct............_ | 105 | 84 |
| ENST00000482663 | GRCh37:21:34878347:34882640:-1 | 122 | ....ct............_ | 105 | 84 |