| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Gene | Start | Alignment | End | % Identity |
| Query | 2 | gttttaggattactatc | 18 | ||
| ENST00000303538 | GRCh37:4:39824483:39979576:-1 | 5504 | ...........g..... | 5520 | 84 |
| ENST00000555506 | GRCh37:14:56138580:56141022:1 | 961 | _..............._ | 947 | 78 |
| ENST00000556631 | GRCh37:14:56138033:56151297:1 | 2487 | _..............._ | 2473 | 78 |