| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Gene | Start | Alignment | End | % Identity |
| Query | 1 | gtcgtcgttgttgtcgtcg | 19 | ||
| ENST00000375003 | GRCh37:1:21069175:21101498:-1 | 3414 | ..t..t............. | 3432 | 89 |
| ENST00000375003 | GRCh37:1:21069175:21101498:-1 | 3426 | ............t._____ | 3439 | 68 |
| ENST00000312239 | GRCh37:1:21069154:21113181:-1 | 2509 | ..t..t............. | 2527 | 89 |
| ENST00000312239 | GRCh37:1:21069154:21113181:-1 | 2521 | ............t._____ | 2534 | 68 |
| ENST00000523581 | GRCh37:1:243384857:243418518:-1 | 78 | ....c..c........... | 60 | 89 |