VIRmiRNA -A database of viral miRNA
VMR_0005 details

miRNA Id:VMR_0005
Virus:Bovine foamy virus (BFV)
Taxonomy:View
Nomenclature:bfv-miR-bf1-3p
miRNA Sequence: ucccugaagccauauccgagg
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):57.14
pre-miRNA:bfv-mir-bf1
pre-miRNA Sequence:uucggaggauggcucaucaagcuaaguaaggagcucccugaagccauauccgaggc
Arm: 3p
Cell line: MDBK cells
Method:Northern blot analysis, RT-PCR
Reference: 24522910
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed