VIRmiRNA -A database of viral miRNA
VMR_0099 details

miRNA Id:VMR_0099
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart11-3p
miRNA Sequence: acgcacaccaggcugacugcc
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):66.67
pre-miRNA:ebv-mir-bart11
pre-miRNA Sequence:ggcuucuguugggucagacaguuuggugcgcuaguugugugcuuagcagcaacgcacaccaggcugacugccuuagcaguguggcc
Arm: 3p
Cell line: Jijoye, BC-1 cells
Method:Cloned, Northern blot analysis
Reference: 16557291, 17604727, 16540699
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed