VIRmiRNA -A database of viral miRNA
VMR_0109 details

miRNA Id:VMR_0109
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart16
miRNA Sequence: uuagauagagugggugugugcucu
Length: 24
Predicted secondary structure (UNAfold):
GC Content (%):45.83
pre-miRNA:ebv-mir-bart16
pre-miRNA Sequence:aggcuuucagguguggaauuuagauagagugggugugugcucuuguuuaauuacaccaagaucaccacccucuauccauaucccacaauugauaaaccu
Arm: 5p
Cell line: Jijoye cells
Method:Northern blot analysis, Cloned
Reference: 16540699, 17604727
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed