VIRmiRNA -A database of viral miRNA
VMR_0222 details

miRNA Id:VMR_0222
Virus:Human cytomegalovirus (HCMV)
Taxonomy:View
Nomenclature:hcmv-miR-ul112-1
miRNA Sequence: aagugacggugagauccaggcu
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):54.55
pre-miRNA:hcmv-mir-ul112
pre-miRNA Sequence:gacagccuccggaucacaugguuacucagcgucugccagccuaagugacggugagauccaggcuguc
Arm: 3p
Cell line: NHDF, U373 cells
Method:Western blot analysis, RT-PCR, Solexa(NGS)
Reference: 17983268, 22013051, 22715351
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed