VIRmiRNA -A database of viral miRNA
VMR_0231 details

miRNA Id:VMR_0231
Virus:Human cytomegalovirus (HCMV)
Taxonomy:View
Nomenclature:hcmv-miR-ul70-3p
miRNA Sequence: ggggaugggcuggcgcgcgg
Length: 20
Predicted secondary structure (UNAfold):
GC Content (%):85
pre-miRNA:hcmv-mir-ul70
pre-miRNA Sequence:gguugcgucucggccucguccagacuggcgaugagcgccgagagggggaugggcuggcgcgcggcc
Arm: 3p
Cell line: Human fibroblast cells
Method:Northern blot analysis, Solexa(NGS)
Reference: 16140786, 22715351
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed