VIRmiRNA -A database of viral miRNA
VMR_0238 details

miRNA Id:VMR_0238
Virus:Human cytomegalovirus (HCMV)
Taxonomy:View
Nomenclature:hcmv-miR-us25-2-5p
miRNA Sequence: agcggucuguucagguggauga
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):54.55
pre-miRNA:hcmv-mir-us25-2
pre-miRNA Sequence:cgguuagcggucuguucagguggaugagggcucuucacggucgggcacucggcugugccugucauccacuuggagagcucccgcgguccg
Arm: 5p
Cell line: BCBL-1, BJAB cells
Method:Cloned
Reference: 15782219, 22013051
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed