miRNA Id: | VMR_0242 |
Virus: | Human cytomegalovirus (HCMV) |
Taxonomy: | View |
Nomenclature: | hcmv-miR-us33-5p |
miRNA Sequence: | gauugugcccggaccgugggcg |
Length: | 22 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 72.73 |
pre-miRNA: | hcmv-mir-us33 |
pre-miRNA Sequence: | cacgguugauugugcccggaccgugggcgcgacgaaacccaccgucacgguccgagcacauccaaacgug |
Arm: | 5p |
Cell line: | BCBL-1, BJAB cells |
Method: | Cloned |
Reference: | 15782219, 22013051, 22715351 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |