VIRmiRNA -A database of viral miRNA
VMR_0242 details

miRNA Id:VMR_0242
Virus:Human cytomegalovirus (HCMV)
Taxonomy:View
Nomenclature:hcmv-miR-us33-5p
miRNA Sequence: gauugugcccggaccgugggcg
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):72.73
pre-miRNA:hcmv-mir-us33
pre-miRNA Sequence:cacgguugauugugcccggaccgugggcgcgacgaaacccaccgucacgguccgagcacauccaaacgug
Arm: 5p
Cell line: BCBL-1, BJAB cells
Method:Cloned
Reference: 15782219, 22013051, 22715351
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed