VIRmiRNA -A database of viral miRNA
VMR_0244 details

miRNA Id:VMR_0244
Virus:Human cytomegalovirus (HCMV)
Taxonomy:View
Nomenclature:hcmv-miR-us4-3p6
miRNA Sequence: ugacagcccgcuacaccucu
Length: 20
Predicted secondary structure (UNAfold):
GC Content (%):60
pre-miRNA:hcmv-miR-us4
pre-miRNA Sequence:auuaguggucgugucgcgacauggacgugcagggggugucugucgcga
Arm: 3p
Cell line: HFF cells
Method:Deep sequencing
Reference: 22715351
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed