VIRmiRNA -A database of viral miRNA
VMR_0252 details

miRNA Id:VMR_0252
Virus:Human herpesvirus 6B (HHV-6)
Taxonomy:View
Nomenclature:hhv6b-miR-ro6-2
miRNA Sequence: uuacaguuuccgcugccgcugu
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):54.55
pre-miRNA:pre-hhv6b-miR-Ro6-2
pre-miRNA Sequence:cggcgacagccgccgccgccguuacugucacuguucaaagaacguggccguuacaguuuccgcugccgcuguggucgccgc
Arm: 3p
Cell line: Sup-T-1 cells
Method:Deep sequencing
Reference: 22114334
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed