miRNA Id: | VMR_0252 |
Virus: | Human herpesvirus 6B (HHV-6) |
Taxonomy: | View |
Nomenclature: | hhv6b-miR-ro6-2 |
miRNA Sequence: | uuacaguuuccgcugccgcugu |
Length: | 22 |
Predicted secondary structure (UNAfold): | ![]() |
GC Content (%): | 54.55 |
pre-miRNA: | pre-hhv6b-miR-Ro6-2 |
pre-miRNA Sequence: | cggcgacagccgccgccgccguuacugucacuguucaaagaacguggccguuacaguuuccgcugccgcuguggucgccgc |
Arm: | 3p |
Cell line: | Sup-T-1 cells |
Method: | Deep sequencing |
Reference: | 22114334 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |