miRNA Id: | VMR_0259 |
Virus: | Human immunodeficiency virus 1 (HIV1) |
Taxonomy: | View |
Nomenclature: | hiv1-miR-n367 |
miRNA Sequence: | acugaccuuuggauggugcuucaa |
Length: | 24 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 45.83 |
pre-miRNA: | hiv1-mir-n367 |
pre-miRNA Sequence: | uuggcagaauuacacaccagggccagggaucagauauccacugaccuuuggauggugcuucaagcuagua |
Arm: | 3p |
Cell line: | MT-4 T, Jurkat T cells |
Method: | Northern blot analysis |
Reference: | 15601474, 15722536 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |