VIRmiRNA -A database of viral miRNA
VMR_0259 details

miRNA Id:VMR_0259
Virus:Human immunodeficiency virus 1 (HIV1)
Taxonomy:View
Nomenclature:hiv1-miR-n367
miRNA Sequence: acugaccuuuggauggugcuucaa
Length: 24
Predicted secondary structure (UNAfold):
GC Content (%):45.83
pre-miRNA:hiv1-mir-n367
pre-miRNA Sequence:uuggcagaauuacacaccagggccagggaucagauauccacugaccuuuggauggugcuucaagcuagua
Arm: 3p
Cell line: MT-4 T, Jurkat T cells
Method:Northern blot analysis
Reference: 15601474, 15722536
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed