VIRmiRNA -A database of viral miRNA
VMR_0319 details

miRNA Id:VMR_0319
Virus:Herpes simplex virus 2 (HSV2)
Taxonomy:View
Nomenclature:hsv2-miR-h10
miRNA Sequence: gggugcgggggugggcgg
Length: 18
Predicted secondary structure (UNAfold):
GC Content (%):88.89
pre-miRNA:hsv2-mir-h10
pre-miRNA Sequence:uuucccccccuacaacaguguuguccguugguugggugguuggggugcgggggugggcgggggaag
Arm: 3p
Cell line: Vero, HEK293T cells
Method:Solexa(NGS)
Reference: 19889786
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed