VIRmiRNA -A database of viral miRNA
VMR_0444 details

miRNA Id:VMR_0444
Virus:Mouse cytomegalovirus (MCMV)
Taxonomy:View
Nomenclature:mcmv-miR-m87-1
miRNA Sequence: aggcagccgucggcagcggcagc
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):78.26
pre-miRNA:mcmv-mir-m87-1
pre-miRNA Sequence:ccgaggcagccgucggcagcggcagcggcagcguugagggcgccgucgccggcggcaccucugg
Arm: 5p
Cell line: MEF, M2-10B4, NIH 3T3 cells
Method:Cloned
Reference: 17942535
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed