VIRmiRNA -A database of viral miRNA
VMR_0517 details

miRNA Id:VMR_0517
Virus:Mareks disease virus type 2 (MDV2)
Taxonomy:View
Nomenclature:mdv2-miR-m28
miRNA Sequence: uuuucucgacgccuacccucgg
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):59.09
pre-miRNA:mdv2-mir-m28
pre-miRNA Sequence:ucgcgauuuucucgacgccuacccucggcguuguucgucggccgaggguaggcgcagaggaaaucgcgg
Arm: 5p
Cell line: MSB-1, CEF cells
Method:Cloned, Solexa(NGS)
Reference: 17459919, 19328516, 24449754
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed