VIRmiRNA -A database of viral miRNA
VMR_0524 details

miRNA Id:VMR_0524
Virus:Mareks disease virus type 2 (MDV2)
Taxonomy:View
Nomenclature:mdv2-miR-m32
miRNA Sequence: uaauagccggacgacggagucu
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):54.55
pre-miRNA:mdv2-mir-m32
pre-miRNA Sequence:cugcgauuccauccuucgacuagcgacuuguuauggcggguaauagccggacgacggagucucgg
Arm: 3p
Cell line: CEF, CK, CEK cells
Method:Solexa(NGS)
Reference: 19328516, 24449754
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed