VIRmiRNA -A database of viral miRNA
VMR_0548 details

miRNA Id:VMR_0548
Virus:Mouse gammaherpesvirus 68 (MGHV)
Taxonomy:View
Nomenclature:mghv-miR-m1-6*
miRNA Sequence: caaccaccucccacaauuuca
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):47.62
pre-miRNA:mghv-mir-m1-6
pre-miRNA Sequence:caaccaccucccacaauuucagagucuuagccagauuaucugaaacugugugaggugguuuuu
Arm: 5p
Cell line: MHV68, NIH3T3, S11 cell line
Method:Cloned, 454
Reference: 15782219, 20668074, 23110115
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed