VIRmiRNA -A database of viral miRNA
VMR_0969 details

miRNA Id:VMR_0969
Virus:Rhesus lymphocryptovirus (RLCV)
Taxonomy:View
Nomenclature:rlcv-miR-rl1-14-3p
miRNA Sequence: ucgcacaucaggcugaacgac
Length: 21
Predicted secondary structure (UNAfold):
GC Content (%):57.14
pre-miRNA:rlcv-mir-rl1-14-1
pre-miRNA Sequence:gcccuccggcugggucggacggucuggugcgcuugauguguuuucgguaccaucgcacaucaggcugaacgacucagaggaguggc
Arm: 3p
Cell line: PEL, BL, LCL cells
Method:Cloned, Northern blot analysis, RT-PCR
Reference: 16557291, 20219930, 19889779
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed