VIRmiRNA -A database of viral miRNA
VMR_1024 details

miRNA Id:VMR_1024
Virus:Rhesus lymphocryptovirus (RLCV)
Taxonomy:View
Nomenclature:rlcv-miR-rl1-3
miRNA Sequence: ucgcaccucgccgucucuacugcu
Length: 24
Predicted secondary structure (UNAfold):
GC Content (%):62.5
pre-miRNA:rlcv-mir-rl1-3
pre-miRNA Sequence:cuggguccucggggggcgguggagaccgcgggugcggugauugcuugacccucgcaccucgccgucucuacugcucgccggguacgucugg
Arm: 3p
Cell line: PEL, BL, LCL cells
Method:Cloned, Solexa(NGS)
Reference: 16557291, 20219930
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed