VIRmiRNA -A database of viral miRNA
VMR_1181 details

miRNA Id:VMR_1181
Virus:Simian virus 40 (SV40)
Taxonomy:View
Nomenclature:sv40-miR-s1-3p
miRNA Sequence: gccuguuucaugcccugagu
Length: 20
Predicted secondary structure (UNAfold):
GC Content (%):55
pre-miRNA:sv40-mir-s1
pre-miRNA Sequence:ugaacagacugugagggcugaggggccugaaaugagccuugagacugugaaucaaugccuguuucaugcccugagucuuccauguucu
Arm: 3p
Cell line: Simian TC7/Db cells
Method:Northern blot analysis
Reference: 15931223
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed