../../tmp/servers/virsirnadb/1127788580
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1930 | 1 | aaaccttcttgtaacatcttatatgat | 27 | |
| AY029767.1 | Nipah virus isolate UMMC1, complete genome | 16286 | ........................... | 16312 | 100 |
| AY029767.1 | Nipah virus isolate UMMC1, complete genome | 15772 | ____________.t..........___ | 15783 | 40 |
| AY029767.1 | Nipah virus isolate UMMC1, complete genome | 11367 | __________________......... | 11375 | 33 |
| AY029767.1 | Nipah virus isolate UMMC1, complete genome | 16874 | _______.........___________ | 16866 | 33 |
| AY029768.1 | Nipah virus isolate UMMC2, complete genome | 16286 | ........................... | 16312 | 100 |
| AY029768.1 | Nipah virus isolate UMMC2, complete genome | 15772 | ____________.t..........___ | 15783 | 40 |
| AY029768.1 | Nipah virus isolate UMMC2, complete genome | 11367 | __________________......... | 11375 | 33 |
| AY029768.1 | Nipah virus isolate UMMC2, complete genome | 16874 | _______.........___________ | 16866 | 33 |
| AJ564621.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-2794 | 16286 | ........................... | 16312 | 100 |
| AJ564621.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-2794 | 15772 | ____________.t..........___ | 15783 | 40 |
| AJ564621.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-2794 | 11367 | __________________......... | 11375 | 33 |
| AJ564621.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-2794 | 16874 | _______.........___________ | 16866 | 33 |
| AJ564622.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-1413 | 16286 | ........................... | 16312 | 100 |
| AJ564622.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-1413 | 15772 | ____________.t..........___ | 15783 | 40 |
| AJ564622.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-1413 | 11367 | __________________......... | 11375 | 33 |
| AJ564622.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-1413 | 16874 | _______.........___________ | 16866 | 33 |
| AJ564623.1 | Nipah virus complete genome, isolate NV/MY/99/UM-0128 | 16286 | ........................... | 16312 | 100 |
| AJ564623.1 | Nipah virus complete genome, isolate NV/MY/99/UM-0128 | 15772 | ____________.t..........___ | 15783 | 40 |
| AJ564623.1 | Nipah virus complete genome, isolate NV/MY/99/UM-0128 | 11367 | __________________......... | 11375 | 33 |
| AJ564623.1 | Nipah virus complete genome, isolate NV/MY/99/UM-0128 | 16874 | _______.........___________ | 16866 | 33 |
| AJ627196.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-0626 | 16286 | ........................... | 16312 | 100 |
| AJ627196.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-0626 | 15772 | ____________.t..........___ | 15783 | 40 |
| AJ627196.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-0626 | 11367 | __________________......... | 11375 | 33 |
| AJ627196.1 | Nipah virus complete genome, isolate NV/MY/99/VRI-0626 | 16874 | _______.........___________ | 16866 | 33 |
| NC_002728.1 | Nipah virus, complete genome | 16286 | ........................... | 16312 | 100 |
| NC_002728.1 | Nipah virus, complete genome | 15772 | ____________.t..........___ | 15783 | 40 |
| NC_002728.1 | Nipah virus, complete genome | 11367 | __________________......... | 11375 | 33 |
| NC_002728.1 | Nipah virus, complete genome | 16874 | _______.........___________ | 16866 | 33 |
| AY988601.1 | Nipah virus from Bangladesh, complete genome | 16292 | ...t..c..............c..... | 16318 | 88 |
| AY988601.1 | Nipah virus from Bangladesh, complete genome | 16132 | ______.g....c.g.........c._ | 16151 | 59 |
| AY988601.1 | Nipah virus from Bangladesh, complete genome | 5298 | _______________..........t. | 5309 | 40 |
| AY988601.1 | Nipah virus from Bangladesh, complete genome | 15778 | ____________.t..........___ | 15789 | 40 |
| AY988601.1 | Nipah virus from Bangladesh, complete genome | 16880 | _______..........__________ | 16871 | 37 |
| AY988601.1 | Nipah virus from Bangladesh, complete genome | 6955 | _____........._____________ | 6947 | 33 |