../../tmp/servers/virsirnadb/1082411987
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1866 | 1 | aagacatagagatggtgtccggagac | 26 | |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 95771 | .......................... | 95796 | 100 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 116094 | ___.a.........a..a._______ | 116109 | 50 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 92014 | ____________.c..........c. | 92001 | 46 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 115110 | ___.........gc..._________ | 115123 | 46 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 89844 | ____________..........g.__ | 89855 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 7563 | ___.........._____________ | 7572 | 38 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 7623 | ___.........._____________ | 7632 | 38 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 7803 | ___.........._____________ | 7812 | 38 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 7890 | ___.........._____________ | 7899 | 38 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 56993 | __..........______________ | 56984 | 38 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 109899 | ________________.......... | 109890 | 38 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 51979 | __..g.cg.g........._______ | 51995 | 50 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 93518 | ________.........g.tat..._ | 93502 | 50 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 120216 | ________.........c.g.at.._ | 120200 | 50 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 58552 | ___.a.........____________ | 58562 | 38 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 63763 | __........._______________ | 63755 | 34 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 93036 | __________........._______ | 93028 | 34 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 96683 | .......................... | 96708 | 100 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 156745 | ...........gg...__________ | 156730 | 53 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 162034 | .t..........._____________ | 162022 | 46 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 117002 | ___.a.........a..a._______ | 117017 | 50 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 92926 | ____________.c..........c. | 92913 | 46 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 116018 | ___.........gc..._________ | 116031 | 46 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 90757 | ____________..........g.__ | 90768 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 57174 | __..........______________ | 57165 | 38 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 110810 | ________________.......... | 110801 | 38 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 52160 | __..g.cg.g........._______ | 52176 | 50 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 94430 | ________.........g.tat..._ | 94414 | 50 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 58667 | ___.a.........____________ | 58677 | 38 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 84789 | _.........a.______________ | 84799 | 38 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 139671 | _____________.........t.__ | 139681 | 38 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 63881 | __........._______________ | 63873 | 34 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 80136 | ____........._____________ | 80144 | 34 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 93948 | __________........._______ | 93940 | 34 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 131132 | ........._________________ | 131140 | 34 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 131493 | __........._______________ | 131485 | 34 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 132105 | ___________.........______ | 132113 | 34 |