../../tmp/servers/virsirnadb/1369109745
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1852 | 1 | agaaggagagctaggccta | 19 | |
| NC_009334.1 | Human herpesvirus 4, complete genome | 170366 | ...........a....... | 170384 | 94 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 44262 | ............g..____ | 44276 | 73 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 103914 | ..........gg..ct... | 103932 | 78 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 118713 | _...........g._____ | 118701 | 63 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 110980 | __...........______ | 110970 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 14099 | _______..c......... | 14110 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 17169 | _______..c......... | 17180 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 20239 | _______..c......... | 20250 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 23309 | _______..c......... | 23320 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 26379 | _______..c......... | 26390 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 29449 | _______..c......... | 29460 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 32519 | _______..c......... | 32530 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 132614 | _..........________ | 132605 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 98764 | .........c.________ | 98754 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 575 | .........__________ | 583 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 13354 | _........._________ | 13346 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 16424 | _........._________ | 16416 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 19494 | _........._________ | 19486 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 22564 | _........._________ | 22556 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 25634 | _........._________ | 25626 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 28704 | _........._________ | 28696 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 31774 | _........._________ | 31766 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 34844 | _........._________ | 34836 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 48900 | .........__________ | 48908 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 59523 | _........._________ | 59531 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 59719 | .........__________ | 59727 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 86666 | _........._________ | 86674 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 98983 | .........__________ | 98975 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 100866 | _........._________ | 100874 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 149227 | ______.........____ | 149219 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 158164 | .........__________ | 158172 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 168426 | _________........._ | 168434 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 44082 | ............g..____ | 44096 | 73 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 103002 | ..........gg..ct... | 103020 | 78 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 117805 | _...........g._____ | 117793 | 63 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 110069 | __...........______ | 110059 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 14152 | _______..c......... | 14163 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 17225 | _______..c......... | 17236 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 20298 | _______..c......... | 20309 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 23371 | _______..c......... | 23382 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 26444 | _______..c......... | 26455 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 29517 | _______..c......... | 29528 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 32590 | _______..c......... | 32601 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 97852 | .........c.________ | 97842 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 575 | .........__________ | 583 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 8494 | _........._________ | 8486 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 13407 | _........._________ | 13399 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 16480 | _........._________ | 16472 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 19553 | _........._________ | 19545 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 22626 | _........._________ | 22618 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 25699 | _........._________ | 25691 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 28772 | _........._________ | 28764 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 31845 | _........._________ | 31837 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 34918 | _........._________ | 34910 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 47176 | _________........._ | 47168 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 48719 | .........__________ | 48727 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 52922 | .........__________ | 52914 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 59411 | _........._________ | 59419 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 59613 | .........__________ | 59621 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 99954 | _........._________ | 99962 | 47 |