../../tmp/servers/virsirnadb/297622143
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2055 | 1 | agagcattggaacgtcgga | 19 | |
| NC_001653.2 | Hepatitis delta virus, complete genome | 69 | ................... | 87 | 100 |
| X04451.1 | Hepatitis delta virus (HDV) RNA genome | 69 | ................... | 87 | 100 |
| M55042.1 | HPDAG Hepatitis D virus delta antigen (HDAg) mRNA, complete cds | 69 | ................... | 87 | 100 |
| M21012.1 | HPDGEN Hepatitis delta virus RNA, complete genome | 69 | ................... | 87 | 100 |
| M92448.1 | HPDHDAG Hepatitis D virus, 5' end | 68 | ................... | 86 | 100 |
| M28267.1 | HPDCG Human hepatitis delta virus encoding delta-antigen RNA, complete | 69 | ................... | 87 | 100 |
| AJ000558.1 | Hepatitis D Virus complete genome | 69 | ................... | 87 | 100 |
| AF098261.1 | AF098261 Hepatitis D virus from Canada, complete genome | 69 | ................... | 87 | 100 |
| AJ307077.1 | Hepatitis delta virus complete genome, isolate W5 | 69 | ................... | 87 | 100 |
| AM779579.1 | Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic | 69 | ................... | 87 | 100 |
| AM779587.1 | Hepatitis delta virus dTk7 LHD gene for large HD antigen, genomic RNA | 69 | ................... | 87 | 100 |
| AM779590.1 | Hepatitis delta virus dTk38 LHD gene for large HD antigen, genomic RN | 70 | ................... | 88 | 100 |
| AM779597.1 | Hepatitis delta virus dTk2 LHD gene for large HD antigen, genomic RNA | 68 | ................... | 86 | 100 |
| AM902163.1 | Hepatitis delta virus dFr2067 LHD gene for large HD antigen, genomic | 69 | ................... | 87 | 100 |
| AM902165.1 | Hepatitis delta virus dFr2172 LHD gene for large HD antigen, genomic | 69 | ................... | 87 | 100 |
| AM902172.1 | Hepatitis delta virus dFr2264 LHD gene for large HD antigen, genomic | 69 | ................... | 87 | 100 |
| AM902175.1 | Hepatitis delta virus dFr2406 LHD gene for large HD antigen, genomic | 69 | ................... | 87 | 100 |
| AM902177.1 | Hepatitis delta virus dFr2012 LHD gene for large HD antigen, genomic | 69 | ................... | 87 | 100 |
| AM902179.1 | Hepatitis delta virus dFr2042 LHD gene for large HD antigen, genomic | 69 | ................... | 87 | 100 |
| HM046802.1 | Hepatitis delta virus isolate JN, complete genome | 69 | ................... | 87 | 100 |
| AM779588.1 | Hepatitis delta virus dTk34 LHD gene for large HD antigen, genomic RN | 68 | .................._ | 85 | 94 |
| X85253.1 | Hepatitis D virus complete genome containing delta antigen ORF | 69 | ...........t....... | 87 | 94 |
| AM779578.1 | Hepatitis delta virus dFr2239b LHD gene for large HD antigen, genomic | 69 | ...............t... | 87 | 94 |
| AM779589.1 | Hepatitis delta virus dTk3 LHD gene for large HD antigen, genomic RNA | 66 | ...c............... | 84 | 94 |
| AM902166.1 | Hepatitis delta virus dFr2189 LHD gene for large HD antigen, genomic | 67 | ...........t....... | 85 | 94 |
| AM779594.1 | Hepatitis delta virus dTk27 LHD gene for large HD antigen, genomic RN | 68 | ....y............._ | 85 | 89 |
| AM902173.1 | Hepatitis delta virus dFr2380 LHD gene for large HD antigen, genomic | 68 | .................__ | 84 | 89 |
| AM779593.1 | Hepatitis delta virus dTk13 LHD gene for large HD antigen, genomic RN | 68 | ..............c..._ | 85 | 89 |
| L22066.1 | HPDAGA Hepatitis delta virus antigen gene, complete cds, and autocleav | 70 | ..............c..__ | 86 | 84 |
| AB118848.1 | Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N1) | 68 | ..............c..__ | 84 | 84 |
| AB118849.1 | Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N2) | 68 | ..............c..__ | 84 | 84 |
| AM779581.1 | Hepatitis delta virus dTk1 LHD gene for large HD antigen, genomic RNA | 68 | ..............c..__ | 84 | 84 |
| AM779582.1 | Hepatitis delta virus dTk35 LHD gene for large HD antigen, genomic RN | 67 | ..............c..__ | 83 | 84 |
| AM779586.1 | Hepatitis delta virus dTk28 LHD gene for large HD antigen, genomic RN | 68 | ...........t.....__ | 84 | 84 |
| AM779596.1 | Hepatitis delta virus dTk21 LHD gene for large HD antigen, genomic RN | 70 | .............a...__ | 86 | 84 |
| AM902174.1 | Hepatitis delta virus dFr2404 LHD gene for large HD antigen, genomic | 69 | ..............c..__ | 85 | 84 |
| X77627.1 | Hepatitis D virus genomic RNA for HDAg | 68 | ...........t.a...a. | 86 | 84 |
| AY633627.1 | Hepatitis delta virus isolate IR-1, complete genome | 68 | ....t.........c..__ | 84 | 78 |
| AY648956.1 | Hepatitis delta virus isolate TW1435#47, complete genome | 68 | .............______ | 80 | 68 |
| AY648957.1 | Hepatitis delta virus isolate TW5132#24, complete genome | 68 | .............______ | 80 | 68 |
| AF425644.1 | Hepatitis D virus isolate TWD2577-66 genotype I, complete genome | 68 | ...........t.______ | 80 | 63 |
| AM779595.1 | Hepatitis delta virus dTk12 LHD gene for large HD antigen, genomic RN | 67 | ....gcgg.........__ | 83 | 68 |
| AJ584845.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-47 | 561 | ______.........____ | 569 | 47 |
| AY648953.1 | Hepatitis delta virus isolate 2621#56, complete genome | 1078 | ________.........__ | 1086 | 47 |