../../tmp/servers/virsirnadb/1826429592
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1845 | 1 | aggcaagctgtccttctttga | 21 | |
| NC_009334.1 | Human herpesvirus 4, complete genome | 136857 | ..................... | 136877 | 100 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 150510 | ____.............g.c. | 150494 | 71 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 46019 | ________..g.......... | 46007 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 76568 | ___..tt..cg.......... | 76585 | 66 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 13386 | ..........___________ | 13377 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 16456 | ..........___________ | 16447 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 19526 | ..........___________ | 19517 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 22596 | ..........___________ | 22587 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 25666 | ..........___________ | 25657 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 28736 | ..........___________ | 28727 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 31806 | ..........___________ | 31797 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 34876 | ..........___________ | 34867 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 54682 | __________.........._ | 54691 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 170708 | _..........__________ | 170717 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 98754 | ______.g.c.........__ | 98766 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 101330 | ____.........gc..____ | 101342 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 155853 | _________.........g._ | 155843 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 12810 | _______........._____ | 12818 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 15880 | _______........._____ | 15888 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 18950 | _______........._____ | 18958 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 22020 | _______........._____ | 22028 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 25090 | _______........._____ | 25098 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 28160 | _______........._____ | 28168 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 31230 | _______........._____ | 31238 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 34300 | _______........._____ | 34308 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 49471 | ____________......... | 49463 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 84027 | _________.........___ | 84019 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 96592 | ____________......... | 96584 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 130612 | ____________......... | 130604 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 165106 | _.........___________ | 165098 | 42 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 166757 | ____________......... | 166765 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 45839 | ________..g.......... | 45827 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 76452 | ___..tt..cg.......... | 76469 | 66 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 13439 | ..........___________ | 13430 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 16512 | ..........___________ | 16503 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 19585 | ..........___________ | 19576 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 22658 | ..........___________ | 22649 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 25731 | ..........___________ | 25722 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 28804 | ..........___________ | 28795 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 31877 | ..........___________ | 31868 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 34950 | ..........___________ | 34941 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 54501 | __________.........._ | 54510 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 97842 | ______.g.c.........__ | 97854 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 100418 | ____.........gc..____ | 100430 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 12860 | _______........._____ | 12868 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 15933 | _______........._____ | 15941 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 19006 | _______........._____ | 19014 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 22079 | _______........._____ | 22087 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 25152 | _______........._____ | 25160 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 28225 | _______........._____ | 28233 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 31298 | _______........._____ | 31306 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 34371 | _______........._____ | 34379 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 83856 | _________.........___ | 83848 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 85941 | _______........._____ | 85933 | 42 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 95680 | ____________......... | 95672 | 42 |