VIRsiRNAdb

../../tmp/servers/virsirnadb/1326322772
Result for your query siRNA sequence

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Strain name	Start	Alignment	End	% Identity
Query	virsi2343	1	`atggctgcttatggtgaca`	19
DQ201177.1	Human enterovirus 70 strain J670/71, complete genome	581	`...................`	599	100
DQ916376.1	Human enterovirus 94 isolate E210, complete genome	581	`...................`	599	100
DQ916376.1	Human enterovirus 94 isolate E210, complete genome	6868	`...at............__`	6884	78
X04468.1	Poliovirus type 3 strain 23127 complete genome	580	`...................`	598	100
X00595.1	Poliovirus type 2 genome (strain Sabin 2 (P712, Ch, 2ab))	577	`...................`	595	100
X00596.1	Poliovirus type 3 mRNA (vaccine strain Sabin 3 (Leon 12a1b))	581	`...................`	599	100
X00596.1	Poliovirus type 3 mRNA (vaccine strain Sabin 3 (Leon 12a1b))	6946	`...at...c........._`	6963	78
X00925.1	Poliovirus type 3 leon 12 a1b sequence (P3/Leon 12 a1b)	579	`...................`	597	100
X00925.1	Poliovirus type 3 leon 12 a1b sequence (P3/Leon 12 a1b)	6944	`...at...c........._`	6961	78
D90457.1	CXA24CG Human coxsackievirus A24 DNA, complete genome	584	`...................`	602	100
D00625.1	POL2CG1 Human poliovirus 2 genomic RNA, complete genome	581	`...................`	599	100
M12197.1	POL2LAN Poliovirus type 2 (Lansing strain), complete genome	581	`...................`	599	100
K01392.1	POL3L37 Poliovirus P3/Leon/37 (type 3), complete genome	579	`...................`	597	100
K01392.1	POL3L37 Poliovirus P3/Leon/37 (type 3), complete genome	6944	`...at...c........._`	6961	78
AJ132960.1	Human poliovirus 1, complete genome. Isolated from faeces of immunode	577	`...................`	595	100
AJ293918.1	Human poliovirus type 3 complete genome, live-attenuated strain USOL-	581	`...................`	599	100
AF405666.1	Human poliovirus 1 isolate HAI01007, complete genome	576	`...................`	594	100
AF405669.1	Human poliovirus 1 isolate HAI00003, complete genome	576	`...................`	594	100
AF405682.1	Human poliovirus 1 isolate DOR00041C1, complete genome	576	`...................`	594	100
AF405682.1	Human poliovirus 1 isolate DOR00041C1, complete genome	1044	`_...t........._____`	1056	63
AF405690.1	Human poliovirus 1 isolate DOR00013, complete genome	576	`...................`	594	100
AF405690.1	Human poliovirus 1 isolate DOR00013, complete genome	1044	`_...t........._____`	1056	63
AY184220.1	Human poliovirus 2 strain Sabin 2, complete genome	577	`...................`	595	100
AY184221.1	Human poliovirus 3 strain Sabin 3, complete genome	579	`...................`	597	100
AY184221.1	Human poliovirus 3 strain Sabin 3, complete genome	6944	`...at...c........._`	6961	78
AF541919.1	Human poliovirus 3 isolate PV3/NOR/01/8 polyprotein mRNA, complete cd	569	`...................`	587	100
AF541919.1	Human poliovirus 3 isolate PV3/NOR/01/8 polyprotein mRNA, complete cd	6934	`...at...c........._`	6951	78
AY238473.1	Human poliovirus 2 strain MEF-1 polyprotein gene, complete cds	581	`...................`	599	100
AY177685.1	Human poliovirus 2, complete genome	577	`...................`	595	100
AY278549.1	Human poliovirus 2 isolate P2S/Mog65-3 (20120), complete genome	577	`...................`	595	100
AY278550.1	Human poliovirus 2 isolate P2S/Mog65-1 (20003), complete genome	577	`...................`	595	100
AY278551.1	Human poliovirus 2 isolate P2S/Mog66-4 (21043), complete genome	577	`...................`	595	100
AY278552.1	Human poliovirus 2 isolate P2S/Mog65-2 (20077), complete genome	577	`...................`	595	100
AY278553.1	Human poliovirus 1 isolate P1W/Bar65 (19276), complete genome	580	`...................`	598	100
AF448782.1	Human poliovirus 2 strain EGY88-074, complete genome	581	`...................`	599	100
AF448782.1	Human poliovirus 2 strain EGY88-074, complete genome	6952	`...at............__`	6968	78
AF448783.1	Human poliovirus 2 strain EGY93-034, complete genome	583	`...................`	601	100
AF499635.1	Human coxsackievirus A1 strain Tompkins, complete genome	578	`...................`	596	100
AF499636.1	Human coxsackievirus A11 strain Belgium-1, complete genome	580	`...................`	598	100
AF499637.1	Human coxsackievirus A13 strain Flores, complete genome	579	`...................`	597	100
AF499638.1	Human coxsackievirus A15 strain G9, complete genome	582	`...................`	600	100
AF499640.1	Human coxsackievirus A18 strain G13, complete genome	578	`...................`	596	100
AF499641.1	Human coxsackievirus A19 strain 8663, complete genome	579	`...................`	597	100
AF499642.1	Human coxsackievirus A20 strain IH35, complete genome	578	`...................`	596	100
AF499643.1	Human coxsackievirus A22 strain Chulman, complete genome	578	`...................`	596	100
AF416342.1	Human poliovirus 1 isolate HAI01-013, complete genome	576	`...................`	594	100
AF458333.1	Human poliovirus 1 isolate HAI01015, complete genome	576	`...................`	594	100
AF465511.1	Human coxsackievirus A13 strain Flores, complete genome	579	`...................`	597	100
AF465512.1	Human coxsackievirus A15 strain G-9, complete genome	582	`...................`	600	100
AF465513.1	Human coxsackievirus A18 strain G-13, complete genome	578	`...................`	596	100
AF465514.1	Human coxsackievirus A20 strain IH Pool 35, complete genome	578	`...................`	596	100
AJ544513.1	Human poliovirus 2 gene for polyprotein, genomic RNA, isolate 102050	577	`...................`	595	100
AY876912.1	Human enterovirus Ningbo3-02, complete genome	579	`...................`	597	100
AY876913.1	Human enterovirus Hangzhou13-02, complete genome	579	`...................`	597	100
AY948201.1	Human poliovirus 2 isolate CHN1025 polyprotein gene, complete cds	578	`...................`	596	100
AM040035.1	Human poliovirus 2 complete virion genome, isolate PV2/4568-1/ISR98	481	`...................`	499	100
AM040036.1	Human poliovirus 2 complete virion genome, isolate PV2/5021-1/ISR99	481	`...................`	499	100
AM040037.1	Human poliovirus 2 complete virion genome, isolate PV2/5074-18/ISR99	481	`...................`	499	100
AM040038.1	Human poliovirus 2 complete virion genome, isolate PV2/5104-1/ISR99	481	`...................`	499	100
AM040039.1	Human poliovirus 2 complete virion genome, isolate PV2/5116-9/ISR99	481	`...................`	499	100
AB205395.1	Human enterovirus C genomic RNA, complete genome, strain: Cambodia-02	579	`...................`	597	100
AB205395.1	Human enterovirus C genomic RNA, complete genome, strain: Cambodia-02	6944	`...at............__`	6960	78
AB205396.1	Human coxsackievirus A18 genomic RNA, complete genome, strain: CAM197	581	`...................`	599	100
DQ205099.1	Human poliovirus 2 clone S2R9, complete genome	577	`...................`	595	100
DQ358078.1	Human coxsackievirus A20 serotype CAV20a, complete genome	583	`...................`	601	100
DQ443001.1	Human coxsackievirus A24 isolate DSO-52/2005, complete genome	584	`...................`	602	100
AM084223.1	Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA,	577	`...................`	595	100
AM084224.1	Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA,	577	`...................`	595	100
AM084225.1	Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA,	577	`...................`	595	100
DQ890385.1	Human poliovirus 2 strain NIE0210766, complete genome	577	`...................`	595	100
DQ890386.1	Human poliovirus 2 strain NIE0110767, complete genome	579	`...................`	597	100
DQ890387.1	Human poliovirus 2 strain USA9810768, complete genome	577	`...................`	595	100
DQ890388.1	Human poliovirus 2 strain PER8310769, complete genome	577	`...................`	595	100
EF026081.1	Human coxsackievirus A24 strain Joseph, complete genome	579	`...................`	597	100
EF026081.1	Human coxsackievirus A24 strain Joseph, complete genome	2753	`________...........`	2743	57
EF456707.1	Human poliovirus 3 isolate K/2002 polyprotein gene, complete cds	539	`...................`	557	100
EF555644.1	Human enterovirus 99, complete genome	580	`...................`	598	100
EF555645.1	Human enterovirus 102, complete genome	579	`...................`	597	100
EF555645.1	Human enterovirus 102, complete genome	1047	`_...t..........c.__`	1062	73
AM884184.1	Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD005	577	`...................`	595	100
AM884185.1	Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD006	577	`...................`	595	100
FM955278.1	Human coxsackievirus A17, complete genome, genomic RNA, isolate cCA17	581	`...................`	599	100
FJ898290.1	Human poliovirus 2 strain Sabine 2 isolate CHN3024/HN/CHN/1999, compl	577	`...................`	595	100
FJ859060.1	Human poliovirus 1 isolate 10091c, complete genome	576	`...................`	594	100
FJ859060.1	Human poliovirus 1 isolate 10091c, complete genome	6953	`...at...c........._`	6970	78
FJ914252.2	Human poliovirus 3 strain SWI10947, complete genome	580	`...................`	598	100
HM107832.1	Human poliovirus 2 isolate CHN1054, complete genome	577	`...................`	595	100
HM107832.1	Human poliovirus 2 isolate CHN1054, complete genome	6952	`...at...c........._`	6969	78
HM107832.1	Human poliovirus 2 isolate CHN1054, complete genome	6419	`_...a........._____`	6431	63
HM107833.1	Human poliovirus 2 isolate CHN1078, complete genome	577	`...................`	595	100
HM107833.1	Human poliovirus 2 isolate CHN1078, complete genome	6952	`...at...c........._`	6969	78
HM107834.1	Human poliovirus 2 isolate CHN3219, complete genome	577	`...................`	595	100
HM107834.1	Human poliovirus 2 isolate CHN3219, complete genome	6952	`...at...c........._`	6969	78
HM107835.1	Human poliovirus 2 isolate CHN8316, complete genome	577	`...................`	595	100
AY673831.1	Human coxsackievirus B3 strain GA, complete genome	582	`...................`	600	100
AY673831.1	Human coxsackievirus B3 strain GA, complete genome	6882	`...at............__`	6898	78
AY896765.1	Human enterovirus B strain EV7-15936-01 from Azerbaijan polyprotein g	557	`...................`	575	100
AY421760.1	Human coxsackievirus A2 strain Fleetwood, complete genome	581	`...................`	599	100
AY773285.1	Human enterovirus 90 isolate F950027, complete genome	582	`...................`	600	100
AY697458.1	Human enterovirus 76 polyprotein gene, complete cds	581	`...................`	599	100
AY697459.1	Human enterovirus 89 polyprotein gene, complete cds	581	`...................`	599	100
AY697460.1	Human enterovirus 90 polyprotein gene, complete cds	583	`...................`	601	100
AY697461.1	Human enterovirus 91 polyprotein gene, complete cds	579	`...................`	597	100
AB192877.1	Human enterovirus 90 genomic RNA, complete genome	583	`...................`	601	100
EF107097.1	Human enterovirus 94 isolate 19/04 from Democratic Republic of the Co	522	`_..................`	539	94
EF107097.1	Human enterovirus 94 isolate 19/04 from Democratic Republic of the Co	6835	`...at............__`	6851	78
V01148.1	Genome of human poliovirus type 1 (Mahoney strain). (One of two versi	575	`_..................`	592	94
V01150.1	Human poliovirus strain Sabin 1 complete genome, strain Sabin 1	577	`_..................`	594	94
AJ132961.1	Human poliovirus 1, complete genome. Isolated from an immunodeficient	578	`_..................`	595	94
AJ416942.1	Human poliovirus 1 genomic RNA for polyprotein, strain CHAT 10A-11	577	`_..................`	594	94
AF462418.1	Human poliovirus 1 99/056-252-14, complete genome	577	`_..................`	594	94
AF462419.1	Human poliovirus 1 RUS-1161-96-001, complete genome	577	`_..................`	594	94
AJ430385.1	Human poliovirus 1 genomic RNA for polyprotein gene, strain Cox	577	`_..................`	594	94
AY184219.1	Human poliovirus 1 strain Sabin 1, complete genome	577	`_..................`	594	94
AF499639.1	Human coxsackievirus A17 strain G12, complete genome	582	`_..................`	599	94
AF546702.1	Human coxsackievirus A21 strain Kuykendall, complete genome	577	`_..................`	594	94
AF546702.1	Human coxsackievirus A21 strain Kuykendall, complete genome	1008	`_.........c.t...___`	994	68
AF465515.1	Human coxsackievirus A21 strain Kuykendall, complete genome	577	`_..................`	594	94
AF465515.1	Human coxsackievirus A21 strain Kuykendall, complete genome	1008	`_.........c.t...___`	994	68
AF538840.1	Human poliovirus 1 isolate TCDCE01-135, complete genome	577	`_..................`	594	94
AF538841.1	Human poliovirus 1 isolate TCDC01-113, complete genome	577	`_..................`	594	94
AF538842.1	Human poliovirus 1 isolate TCDC01-330, complete genome	577	`_..................`	594	94
AF538843.1	Human poliovirus 1 isolate TCDC01-861, complete genome	577	`_..................`	594	94
AY560657.1	Human poliovirus 1 strain Brunhilde, complete genome	581	`_..................`	598	94
AF111984.2	Human poliovirus 1 isolate CHN-Jiangxi/89-1, complete genome	580	`_..................`	597	94
AB180070.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Mindan	577	`_..................`	594	94
AB180071.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon-	577	`_..................`	594	94
AB180072.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon-	577	`_..................`	594	94
AB180073.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon-	577	`_..................`	594	94
AY928384.1	Human poliovirus 1 isolate d224-2002037606 polyprotein gene, complete	577	`_..................`	594	94
AY928385.1	Human poliovirus 1 isolate d054-2002037604 polyprotein gene, complete	577	`_..................`	594	94
AY928386.1	Human poliovirus 1 isolate d179-2002037605 polyprotein gene, complete	577	`_..................`	594	94
AY928387.1	Human poliovirus 1 isolate d018-2002037602 polyprotein gene, complete	577	`_..................`	594	94
EF015886.1	Human enterovirus 96 strain BAN00-10488, complete genome	581	`_..................`	598	94
EF015886.1	Human enterovirus 96 strain BAN00-10488, complete genome	1048	`_...t..g.........__`	1063	73
EF682343.1	Human poliovirus 1 strain USA10774 polyprotein gene, complete cds	551	`_..................`	568	94
EF682344.1	Human poliovirus 1 strain USA10775 polyprotein gene, complete cds	551	`_..................`	568	94
EF682345.1	Human poliovirus 1 strain USA10773 polyprotein gene, complete cds	551	`_..................`	568	94
EF682346.1	Human poliovirus 1 strain USA10780 polyprotein gene, complete cds	551	`_..................`	568	94
EF682347.1	Human poliovirus 1 strain USA10781 polyprotein gene, complete cds	551	`_..................`	568	94
EF682348.1	Human poliovirus 1 strain USA10782 polyprotein gene, complete cds	551	`_..................`	568	94
EF682349.1	Human poliovirus 1 strain USA10771 polyprotein gene, complete cds	551	`_..................`	568	94
EF682350.1	Human poliovirus 1 strain USA10772 polyprotein gene, complete cds	551	`_..................`	568	94
EF682351.1	Human poliovirus 1 strain USA10778 polyprotein gene, complete cds	551	`_..................`	568	94
EF682352.1	Human poliovirus 1 strain USA10770 polyprotein gene, complete cds	551	`_..................`	568	94
EF682353.1	Human poliovirus 1 strain USA10777 polyprotein gene, complete cds	551	`_..................`	568	94
EF682354.1	Human poliovirus 1 strain USA10779 polyprotein gene, complete cds	551	`_..................`	568	94
EF682355.1	Human poliovirus 1 strain USA10776 polyprotein gene, complete cds	551	`_..................`	568	94
EF682356.1	Human poliovirus 1 strain USA10784, complete genome	577	`_..................`	594	94
EF682357.1	Human poliovirus 1 strain USA10785, complete genome	577	`_..................`	594	94
EF682358.1	Human poliovirus 1 strain USA10783, complete genome	577	`_..................`	594	94
EF682359.1	Human poliovirus 1 strain USA10786, complete genome	577	`_..................`	594	94
EU794953.1	Human poliovirus 1 isolate A21 polyprotein gene, complete cds	529	`_..................`	546	94
EU794954.1	Human poliovirus 1 isolate A49 polyprotein gene, complete cds	529	`_..................`	546	94
EU794955.1	Human poliovirus 1 isolate A63 polyprotein gene, complete cds	529	`_..................`	546	94
EU794956.1	Human poliovirus 1 isolate A84 polyprotein gene, complete cds	529	`_..................`	546	94
EU794957.1	Human poliovirus 1 isolate A88 polyprotein gene, complete cds	529	`_..................`	546	94
EU794958.1	Human poliovirus 1 isolate A91 polyprotein gene, complete cds	529	`_..................`	546	94
EU794959.1	Human poliovirus 1 isolate A102 polyprotein gene, complete cds	529	`_..................`	546	94
EU794960.1	Human poliovirus 1 isolate A105 polyprotein gene, complete cds	529	`_..................`	546	94
EU794961.1	Human poliovirus 1 isolate A118 polyprotein gene, complete cds	529	`_..................`	546	94
EU794962.1	Human poliovirus 1 isolate A199 polyprotein gene, complete cds	529	`_..................`	546	94
EU794963.1	Human poliovirus 1 isolate A449 polyprotein gene, complete cds	529	`_..................`	546	94
EU794964.1	Human poliovirus 1 isolate A649 polyprotein gene, complete cds	529	`_..................`	546	94
FJ769378.1	Human poliovirus 1 strain CHN8184/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ769379.1	Human poliovirus 1 strain CHN8229-1/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ769380.1	Human poliovirus 1 strain CHN8229-2/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ769381.1	Human poliovirus 1 strain CHN8229-3/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ769382.1	Human poliovirus 1 strain CHN8233c/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ769383.1	Human poliovirus 1 strain CHN8225c/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ769384.1	Human poliovirus 1 strain CHN8248c/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ769385.1	Human poliovirus 1 strain CHN8264c/GZ/CHN/2004, complete genome	577	`_..................`	594	94
FJ859058.1	Human poliovirus 1 isolate 10050, complete genome	577	`_..................`	594	94
FJ859058.1	Human poliovirus 1 isolate 10050, complete genome	6953	`...at...c........._`	6970	78
FJ859059.1	Human poliovirus 1 isolate 10086c, complete genome	577	`_..................`	594	94
FJ859059.1	Human poliovirus 1 isolate 10086c, complete genome	6953	`...at...c........._`	6970	78
FJ859061.1	Human poliovirus 1 isolate 10092c, complete genome	577	`_..................`	594	94
FJ859061.1	Human poliovirus 1 isolate 10092c, complete genome	6953	`...at...c........._`	6970	78
FJ859062.1	Human poliovirus 1 isolate 10094c, complete genome	577	`_..................`	594	94
FJ859062.1	Human poliovirus 1 isolate 10094c, complete genome	6953	`...at............._`	6970	84
FJ859063.1	Human poliovirus 1 isolate 10095c, complete genome	577	`_..................`	594	94
FJ859063.1	Human poliovirus 1 isolate 10095c, complete genome	6953	`...at...c........._`	6970	78
FJ859064.1	Human poliovirus 1 isolate 10097c, complete genome	577	`_..................`	594	94
FJ859064.1	Human poliovirus 1 isolate 10097c, complete genome	6953	`...at............._`	6970	84
X67706.1	Coxsackievirus B5 complete genome	583	`_..................`	600	94
X67706.1	Coxsackievirus B5 complete genome	6882	`...atc............_`	6899	78
X05690.1	Coxsackievirus B4 complete genome	583	`_..................`	600	94
D00627.1	CXA9CG Human coxsackievirus A9 genomic RNA, complete genome, strain: G	583	`_..................`	600	94
D00627.1	CXA9CG Human coxsackievirus A9 genomic RNA, complete genome, strain: G	6930	`...at............._`	6947	84
M33854.1	CXA3CG Coxsackievirus B3 (CVB3) complete genome	581	`_..................`	598	94
M16572.1	CXA3G Coxsackievirus B3, complete genome	580	`_..................`	597	94
M88483.1	CXAB3CG Coxsackievirus B3 mRNA, complete genome	582	`_..................`	599	94
X80059.1	Echo Virus 11 genomic DNA	584	`_..................`	601	94
X84981.1	Echovirus 9 (strain Hill), complete genome	579	`_..................`	596	94
X84981.1	Echovirus 9 (strain Hill), complete genome	6902	`...at............._`	6919	84
U16283.1	E6U16283 Echovirus 6 lytic strain, complete genome	581	`_..................`	598	94
U16283.1	E6U16283 Echovirus 6 lytic strain, complete genome	6898	`...at............__`	6914	78
S76772.1	polyprotein [Coxsackie B4 virus CB4, host=mice, E2, originally derive	584	`_..................`	601	94
X92886.1	Echovirus 9 (strain Barty), complete genome	580	`_..................`	597	94
U57056.1	CXU57056 Coxsackievirus B3 Woodruff variant, complete genome	582	`_..................`	599	94
U57056.1	CXU57056 Coxsackievirus B3 Woodruff variant, complete genome	6881	`...at............._`	6898	84
X79047.1	Echovirus type 12, prototype Travis wild type genome	581	`_..................`	598	94
X77708.1	Echovirus type 12, prototype Travis complete RNA genome	581	`_..................`	598	94
AF039205.1	Coxsackievirus B6 strain Schmitt, complete genome	583	`_..................`	600	94
AF083069.1	Echovirus 5, complete genome	582	`_..................`	599	94
AF085363.1	Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds	582	`_..................`	599	94
AF085363.1	Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds	6887	`...at...a........._`	6904	78
AF162711.1	Echovirus 30 strain Bastianni, complete genome	584	`_..................`	601	94
AF162711.1	Echovirus 30 strain Bastianni, complete genome	6916	`...ata...........__`	6932	73
AF081485.1	Coxsackievirus B2 strain Ohio, complete genome	582	`_..................`	599	94
AF081485.1	Coxsackievirus B2 strain Ohio, complete genome	6887	`...at...a........._`	6904	78
AF105342.1	Coxsackievirus B6 strain Schmitt, complete genome	583	`_..................`	600	94
AF114383.1	Coxsackievirus B5 strain Faulkner, complete genome	582	`_..................`	599	94
AF114383.1	Coxsackievirus B5 strain Faulkner, complete genome	6881	`...at...a........._`	6898	78
AF114384.1	Coxsackievirus B6 strain Schmitt, complete genome	582	`_..................`	599	94
AF230973.1	AF230973 Enterovirus Yanbian 96-83csf, complete genome	588	`_..................`	605	94
AF231763.1	Coxsackievirus B3 strain 31-1-93, complete genome	582	`_..................`	599	94
AF231764.1	Coxsackievirus B3 strain P, complete genome	582	`_..................`	599	94
AF231765.1	Coxsackievirus B3 strain PD, complete genome	582	`_..................`	599	94
AF241359.1	Enterovirus CA55-1988, complete genome	584	`_..................`	601	94
AY036578.1	Human echovirus 7 strain UMMC polyprotein gene, complete cds	581	`_..................`	598	94
AY036578.1	Human echovirus 7 strain UMMC polyprotein gene, complete cds	6907	`...at............__`	6923	78
AY036579.1	Human echovirus 7 strain Wallace polyprotein gene, complete cds	582	`_..................`	599	94
AY036579.1	Human echovirus 7 strain Wallace polyprotein gene, complete cds	6908	`...at...a........._`	6925	78
AF311938.1	Human echovirus 30 strain Bastianni, complete genome	589	`_..................`	606	94
AF311938.1	Human echovirus 30 strain Bastianni, complete genome	6921	`...ata...........__`	6937	73
AF311939.1	Human coxsackievirus B4 strain E2 variant, complete genome	584	`_..................`	601	94
AF317694.1	Human echovirus 18 strain Metcalf polyprotein gene, complete cds	580	`_..................`	597	94
AF317694.1	Human echovirus 18 strain Metcalf polyprotein gene, complete cds	6891	`...at...a........._`	6908	78
AJ276224.1	Human echovirus 11 genomic RNA for polyprotein	582	`_..................`	599	94
AF328683.1	Human coxsackievirus B4 polyprotein-like gene, complete sequence	582	`_..................`	599	94
AF524866.1	Human echovirus 9 strain Barty, complete genome	582	`_..................`	599	94
AF524867.1	Human echovirus 9 isolate DM, complete genome	582	`_..................`	599	94
AY186745.1	Human coxsackievirus B1 clone pMP1.24 polyprotein gene, complete cds	562	`_..................`	579	94
AY186746.1	Human coxsackievirus B1 clone pMP1.23 polyprotein gene, complete cds	562	`_..................`	579	94
AY186747.1	Human coxsackievirus B1 clone pAMP2.17 polyprotein gene, complete cds	562	`_..................`	579	94
AY186748.1	Human coxsackievirus B1 clone pAMP2.22 polyprotein gene, complete cds	562	`_..................`	579	94
AJ493062.2	Human enterovirus 77 gene for polyprotein, genomic RNA, isolate CF496	582	`_..................`	599	94
AF465516.1	Human echovirus 7 strain Wallace, complete genome	582	`_..................`	599	94
AF465516.1	Human echovirus 7 strain Wallace, complete genome	6908	`...at...a........._`	6925	78
AF465517.1	Human echovirus 6 strain Charles, complete genome	582	`_..................`	599	94
AF465517.1	Human echovirus 6 strain Charles, complete genome	6899	`...at............__`	6915	78
AF465518.1	Human echovirus 2 strain Cornelis, complete genome	581	`_..................`	598	94
AY302539.1	Human echovirus 13 strain Del Carmen complete genome	582	`_..................`	599	94
AY302540.1	Human echovirus 14 strain Tow complete genome	581	`_..................`	598	94
AY302540.1	Human echovirus 14 strain Tow complete genome	6931	`...at...a........._`	6948	78
AY302541.1	Human echovirus 15 strain CH 96-51 complete genome	583	`_..................`	600	94
AY302541.1	Human echovirus 15 strain CH 96-51 complete genome	6918	`...at............._`	6935	84
AY302542.1	Human echovirus 16 strain Harrington complete genome	582	`_..................`	599	94
AY302543.1	Human echovirus 17 strain CHHE-29 complete genome	583	`_..................`	600	94
AY302545.1	Human echovirus 2 strain Cornelis complete genome	581	`_..................`	598	94
AY302546.1	Human echovirus 20 strain JV-1 complete genome	582	`_..................`	599	94
AY302547.1	Human echovirus 21 strain Farina complete genome	581	`_..................`	598	94
AY302547.1	Human echovirus 21 strain Farina complete genome	6907	`...at............._`	6924	84
AY302548.1	Human echovirus 24 strain DeCamp complete genome	582	`_..................`	599	94
AY302549.1	Human echovirus 25 strain JV-4 complete genome	581	`_..................`	598	94
AY302550.1	Human echovirus 26 strain Coronel complete genome	581	`_..................`	598	94
AY302551.1	Human echovirus 27 strain Bacon complete genome	584	`_..................`	601	94
AY302552.1	Human echovirus 29 strain JV-10 complete genome	582	`_..................`	599	94
AY302553.1	Human echovirus 3 strain Morrisey complete genome	583	`_..................`	600	94
AY302554.1	Human echovirus 31 strain Caldwell complete genome	581	`_..................`	598	94
AY302555.1	Human echovirus 32 strain PR-10 complete genome	572	`_..................`	589	94
AY302556.1	Human echovirus 33 strain Toluca-3 complete genome	582	`_..................`	599	94
AY302557.1	Human echovirus 4 strain Pesacek complete genome	582	`_..................`	599	94
AY302557.1	Human echovirus 4 strain Pesacek complete genome	6875	`...at............._`	6892	84
AY302558.1	Human echovirus 6 strain D'Amori complete genome	582	`_..................`	599	94
AY302558.1	Human echovirus 6 strain D'Amori complete genome	6899	`...at............__`	6915	78
AY302559.1	Human echovirus 7 strain Wallace complete genome	582	`_..................`	599	94
AY302559.1	Human echovirus 7 strain Wallace complete genome	6908	`...at...a........._`	6925	78
AY302560.1	Enterovirus 69 strain Toluca-1 complete genome	584	`_..................`	601	94
AY556057.1	Enterovirus 74 strain USA/CA75-10213, complete genome	582	`_..................`	599	94
AY556070.1	Enterovirus 75 strain USA/OK85-10362, complete genome	587	`_..................`	604	94
AJ577589.1	Human echovirus 11, isolate HUN-1108, complete virion genome	584	`_..................`	601	94
AJ577590.1	Human echovirus 11, isolate FIN-0666, complete virion genome	584	`_..................`	601	94
AJ577594.1	Human echovirus 11, isolate ROU-9191, complete virion genome	584	`_..................`	601	94
AY752946.1	Human coxsackievirus B3 strain 20, complete genome	582	`_..................`	599	94
AY896762.1	Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein	562	`_..................`	579	94
AY896762.1	Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein	6861	`...ata...........__`	6877	73
AY843297.1	Human enterovirus 79 strain USA/CA79-10384, complete genome	585	`_..................`	602	94
AY843298.1	Human enterovirus 80 strain USA/CA67-10387, complete genome	583	`_..................`	600	94
AY843299.1	Human enterovirus 81 strain USA/CA68-10389, complete genome	579	`_..................`	596	94
AY843300.1	Human enterovirus 82 strain USA/CA64-10390, complete genome	585	`_..................`	602	94
AY843301.1	Human enterovirus 83 strain USA/CA76-10392, complete genome	582	`_..................`	599	94
AY843302.1	Human enterovirus 77 strain USA/TX97-10394, complete genome	589	`_..................`	606	94
AY843303.1	Human enterovirus 85 strain BAN00-10353, complete genome	582	`_..................`	599	94
AY843304.1	Human enterovirus 86 strain BAN00-10354, complete genome	582	`_..................`	599	94
AY843305.1	Human enterovirus 87 strain BAN01-10396, complete genome	583	`_..................`	600	94
AY843306.1	Human enterovirus 88 strain BAN01-10398, complete genome	584	`_..................`	601	94
AY843307.1	Human enterovirus 97 strain BAN99-10355, complete genome	582	`_..................`	599	94
AY843308.1	Human enterovirus 101 strain CIV03-10361, complete genome	582	`_..................`	599	94
AJ849942.1	Human echovirus 3 gene for polyprotein, genomic RNA, strain PicoBank/	582	`_..................`	599	94
DQ246620.1	Human echovirus 30 strain Echo30/Zhejiang/17/03/CSF, complete genome	583	`_..................`	600	94
DQ246620.1	Human echovirus 30 strain Echo30/Zhejiang/17/03/CSF, complete genome	6909	`...at............__`	6925	78
DQ480420.1	Human coxsackievirus B4 strain Tuscany, complete genome	583	`_..................`	600	94
DQ534205.1	Human echovirus 30 isolate 14916net87, complete genome	584	`_..................`	601	94
DQ902712.1	Human enterovirus 84 isolate CIV2003-10603, complete genome	584	`_..................`	601	94
EF174468.1	Human coxsackievirus B2 isolate KOR 04-243, complete genome	582	`_..................`	599	94
EF174469.1	Human coxsackievirus B2 isolate KOR 04-279, complete genome	582	`_..................`	599	94
EF174469.1	Human coxsackievirus B2 isolate KOR 04-279, complete genome	6887	`...at............__`	6903	78
EF371880.2	Human enterovirus B isolate SE-03-78616, complete genome	583	`_..................`	600	94
EF634316.1	Human echovirus 11 strain D207, complete genome	585	`_..................`	602	94
EU147493.1	Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds	581	`_..................`	598	94
EU147493.1	Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds	6874	`...at............__`	6890	78
EU144042.1	Human coxsackievirus B3 isolate CVB3-MCH polyprotein gene, complete c	582	`_..................`	599	94
AB426610.1	Human enterovirus 79 genomic RNA, complete genome, strain: NH95-0601	581	`_..................`	598	94
AB426611.1	Human enterovirus 97 genomic RNA, complete genome, strain: DT94-0227	582	`_..................`	599	94
FJ000001.1	Human coxsackievirus B3 strain Fuyang19, complete genome	581	`_..................`	598	94
FJ172447.1	Human echovirus 4 strain AUS250G, complete genome	586	`_..................`	603	94
FJ357838.1	Human coxsackievirus B3 strain GZ803, complete genome	584	`_..................`	601	94
FJ357838.1	Human coxsackievirus B3 strain GZ803, complete genome	6883	`...at...a........._`	6900	78
GQ141875.1	Human coxsackievirus B3 strain Beijing0811, complete genome	583	`_..................`	600	94
AB501329.1	Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-2	583	`_..................`	600	94
AB501332.1	Human echovirus 13 gene for polyprotein, complete cds, strain: S3(1)-	583	`_..................`	600	94
HM031191.1	Human echovirus 25 strain HN-2, complete genome	584	`_..................`	601	94
AY752944.2	Human coxsackievirus B3 strain 28, complete genome	582	`_..................`	599	94
HM185055.1	Human echovirus 6 strain Echo6/Henan/116/2008, complete genome	583	`_..................`	600	94
HM185056.1	Human enterovirus B strain EVB/Henan/127/2008, complete genome	560	`_..................`	577	94
HM775882.1	Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome	578	`_..................`	595	94
HM777023.1	Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome	583	`_..................`	600	94
U22521.1	ETU22521 Human enterovirus 71 polyprotein gene, complete cds	583	`_..................`	600	94
U22522.1	ETU22522 Human enterovirus 71 polyprotein gene, complete cds	584	`_..................`	601	94
AF119795.2	Enterovirus 71 strain TW/2272/98 polyprotein gene, complete cds	581	`_..................`	598	94
AF136379.1	Enterovirus 71 isolate NCKU9822 polyprotein mRNA, complete cds	583	`_..................`	600	94
AF119796.3	Enterovirus 71 strain TW/2086/98 polyprotein gene, complete cds	581	`_..................`	598	94
AF176044.1	Enterovirus 71 polyprotein gene, complete cds	584	`_..................`	601	94
AF177911.1	Coxsackievirus A16 polyprotein gene, complete cds	585	`_..................`	602	94
AF302996.1	Enterovirus 71 strain SHZH98 polyprotein gene, complete cds	583	`_..................`	600	94
AF304457.1	Enterovirus 71 strain Tainan/5746/98 polyprotein mRNA, complete cds	583	`_..................`	600	94
AF304457.1	Enterovirus 71 strain Tainan/5746/98 polyprotein mRNA, complete cds	2551	`...........________`	2541	57
AF304458.1	Enterovirus 71 strain Tainan/4643/98 polyprotein mRNA, complete cds	583	`_..................`	600	94
AF304459.1	Enterovirus 71 strain Tainan/6092/98 polyprotein mRNA, complete cds	583	`_..................`	600	94
AY465356.1	Human enterovirus 71 strain SHZH03, complete genome	580	`_..................`	597	94
AY421761.1	Human coxsackievirus A3 strain Olson, complete genome	582	`_..................`	599	94
AY421762.1	Human coxsackievirus A4 strain High Point, complete genome	587	`_..................`	604	94
AY421763.1	Human coxsackievirus A5 strain Swartz, complete genome	581	`_..................`	598	94
AY421764.1	Human coxsackievirus A6 strain Gdula, complete genome	585	`_..................`	602	94
AY421765.1	Human coxsackievirus A7 strain Parker, complete genome	582	`_..................`	599	94
AY421766.1	Human coxsackievirus A8 strain Donovan, complete genome	583	`_..................`	600	94
AY421767.1	Human coxsackievirus A10 strain Kowalik, complete genome	584	`_..................`	601	94
AY421768.1	Human coxsackievirus A12 strain Texas-12, complete genome	585	`_..................`	602	94
AY421769.1	Human coxsackievirus A14 strain G-14, complete genome	589	`_..................`	606	94
AJ586873.1	Human enterovirus 71 gene for polyprotein, isolate EV71/9/97/SHA89	584	`_..................`	601	94
AY790926.1	Human coxsackievirus A16 strain shzh00-1, complete genome	585	`_..................`	602	94
AB204852.1	Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-TR	583	`_..................`	600	94
AB204853.1	Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-ts	583	`_..................`	600	94
DQ060149.1	Human enterovirus 71 strain pinf7-54A from Taiwan, complete genome	583	`_..................`	600	94
DQ060149.1	Human enterovirus 71 strain pinf7-54A from Taiwan, complete genome	2551	`...........________`	2541	57
DQ133458.1	Human enterovirus 71 strain 984 polyprotein gene, complete cds	580	`_..................`	597	94
DQ133459.1	Human enterovirus 71 strain 1235 polyprotein gene, complete cds	580	`_..................`	597	94
DQ341354.1	Human enterovirus 71 isolate 3799-SIN-98, complete genome	585	`_..................`	602	94
DQ341355.1	Human enterovirus 71 isolate 06-KOR-00, complete genome	582	`_..................`	599	94
DQ341355.1	Human enterovirus 71 isolate 06-KOR-00, complete genome	2550	`...........________`	2540	57
DQ341356.1	Human enterovirus 71 isolate 03-KOR-00, complete genome	582	`_..................`	599	94
DQ341356.1	Human enterovirus 71 isolate 03-KOR-00, complete genome	2550	`...........________`	2540	57
DQ341357.1	Human enterovirus 71 isolate 7F-AUS-6-99, complete genome	582	`_..................`	599	94
DQ341357.1	Human enterovirus 71 isolate 7F-AUS-6-99, complete genome	2550	`...........________`	2540	57
DQ341358.1	Human enterovirus 71 isolate S40221-SAR-00, complete genome	582	`_..................`	599	94
DQ341359.1	Human enterovirus 71 isolate S10862-SAR-98, complete genome	582	`_..................`	599	94
DQ341360.1	Human enterovirus 71 isolate J115-MAL-01, complete genome	581	`_..................`	598	94
DQ341361.1	Human enterovirus 71 isolate 1M-AUS-12-00, complete genome	582	`_..................`	599	94
DQ341362.1	Human enterovirus 71 isolate SB12736-SAR-03, complete genome	585	`_..................`	602	94
DQ341363.1	Human enterovirus 71 isolate S19841-SAR-03, complete genome	585	`_..................`	602	94
DQ341364.1	Human enterovirus 71 isolate 5511-SIN-00, complete genome	585	`_..................`	602	94
DQ341366.1	Human enterovirus 71 isolate SB2864-SAR-00, complete genome	584	`_..................`	601	94
DQ341367.1	Human enterovirus 71 isolate MY821-3-SAR-97, complete genome	584	`_..................`	601	94
DQ341368.1	Human enterovirus 71 isolate MY104-9-SAR-97, complete genome	584	`_..................`	601	94
DQ381846.1	Human enterovirus 71 strain 6F/AUS/6/99, complete genome	582	`_..................`	599	94
AM396584.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P	581	`_..................`	598	94
AM396584.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P	2549	`...........________`	2539	57
AM396585.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P	581	`_..................`	598	94
AM396586.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate EV71/	584	`_..................`	601	94
AM396587.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate UH1/P	584	`_..................`	601	94
AM396588.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate EV71/	575	`_..................`	592	94
EF063152.1	Human enterovirus 71 strain E2005125-TW polyprotein gene, complete cd	582	`_..................`	599	94
EF373575.1	Human enterovirus 71 strain E2002042-TW-CDC polyprotein gene, complet	586	`_..................`	603	94
EF373576.1	Human enterovirus 71 strain E2004104-TW-CDC polyprotein gene, complet	580	`_..................`	597	94
EF667343.1	Simian enterovirus 46 strain RNM5, complete genome	581	`_..................`	598	94
EF667344.1	Human enterovirus 92 strain RJG7, complete genome	581	`_..................`	598	94
EU131776.1	Human enterovirus 71 strain N3340-TW-02, complete genome	580	`_..................`	597	94
EU262658.1	Human coxsackievirus A16 strain shzh05-1, complete genome	585	`_..................`	602	94
AF326764.2	Simian enterovirus 46 strain OM22 (P15), complete genome	580	`_..................`	597	94
EU364841.1	Human enterovirus 71 strain 26M/AUS/4/99, complete genome	585	`_..................`	602	94
EU376004.1	Human enterovirus 71 26M/AUS/4/99 CHO cell-adapted, complete genome	585	`_..................`	602	94
EU376005.1	Human enterovirus 71 26M/AUS/4/99 mouse-adapted, complete genome	585	`_..................`	602	94
EU414334.1	Human enterovirus 71 strain PLday4-CH-06, complete genome	581	`_..................`	598	94
EU414335.1	Human enterovirus 71 strain PLday1-CH-06, complete genome	581	`_..................`	598	94
EU703812.1	Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/1, complete	580	`_..................`	597	94
EU703813.1	Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/2, complete	580	`_..................`	597	94
EU703814.1	Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/3, complete	580	`_..................`	597	94
EU812514.1	Human coxsackievirus A16 strain FY18 from China, complete genome	588	`_..................`	605	94
EU812515.1	Human enterovirus 71 strain FY23 from China, complete genome	583	`_..................`	600	94
EU864507.1	Human enterovirus 71 isolate EV71/Zhejiang08, complete genome	581	`_..................`	598	94
EU864507.1	Human enterovirus 71 isolate EV71/Zhejiang08, complete genome	1044	`..a.t..g.........__`	1060	73
FJ172159.1	Human enterovirus 71 isolate NUH0075/SIN/08, complete genome	543	`_..................`	560	94
FJ172159.1	Human enterovirus 71 isolate NUH0075/SIN/08, complete genome	2511	`...........________`	2501	57
FJ158600.1	Human enterovirus 71 isolate DTID/ZJU-62, complete genome	580	`_..................`	597	94
FJ158601.1	Human enterovirus 71 isolate DTID/ZJU-74, complete genome	580	`_..................`	597	94
FJ194964.1	Human enterovirus 71 strain EV71/GDFS/3/2008, complete genome	580	`_..................`	597	94
FJ194965.1	Human enterovirus 71 strain EV71/GDSG/17/2008, complete genome	580	`_..................`	597	94
FJ198212.1	Human coxsackievirus A16 strain GZ08, complete genome	585	`_..................`	602	94
AB469182.1	Human enterovirus 71 gene for polyprotein, complete cds, strain: SK-E	583	`_..................`	600	94
AB469183.1	Human enterovirus 71 gene for polyprotein, complete cds, strain: EV71	583	`_..................`	600	94
FJ360544.1	Human enterovirus 71 isolate GZ-08-01, complete genome	579	`_..................`	596	94
FJ360545.1	Human enterovirus 71 isolate GZ-08-02, complete genome	580	`_..................`	597	94
FJ360546.1	Human enterovirus 71 isolate GZ-08-03, complete genome	579	`_..................`	596	94
FJ439769.1	Human enterovirus 71 strain Fuyang-0805, complete genome	580	`_..................`	597	94
FJ461781.1	Human enterovirus 71 isolate NUH0083/SIN/08, complete genome	549	`_..................`	566	94
FJ606447.1	Human enterovirus 71 strain BJ08-Z004-3, complete genome	580	`_..................`	597	94
FJ606448.1	Human enterovirus 71 strain BJ08-Z011-4, complete genome	580	`_..................`	597	94
FJ606448.1	Human enterovirus 71 strain BJ08-Z011-4, complete genome	6905	`....t.........a..._`	6922	84
FJ606449.1	Human enterovirus 71 strain BJ08-Z020-1, complete genome	580	`_..................`	597	94
FJ606450.1	Human enterovirus 71 strain BJ08-Z025-5, complete genome	580	`_..................`	597	94
AB482183.1	Human enterovirus 71 genomic RNA, complete genome, strain: Nagoya	585	`_..................`	602	94
AB482183.1	Human enterovirus 71 genomic RNA, complete genome, strain: Nagoya	1048	`..a.t..g.........__`	1064	73
FJ713137.1	Human enterovirus 71 strain Shanghai 036-2009, complete genome	582	`_..................`	599	94
FJ828519.1	Human enterovirus 71 isolate BJ08, complete genome	559	`_..................`	576	94
FJ607334.1	Human enterovirus 71 strain 1/SHENZHEN/08/China/HFMD/2008, complete g	579	`_..................`	596	94
FJ607335.1	Human enterovirus 71 strain 4/SHENZHEN/08/China/HFMD/2008, complete g	579	`_..................`	596	94
FJ607336.1	Human enterovirus 71 strain 28/SHENZHEN/08/China/HFMD/2008, complete	578	`_..................`	595	94
FJ607337.1	Human enterovirus 71 strain 121/SHENZHEN/08/China/HFMD Fatal/2008, co	579	`_..................`	596	94
FJ607338.1	Human enterovirus 71 strain 605/SHENZHEN/08/China/HFMD Severe/2008, c	579	`_..................`	596	94
GQ892830.1	Human enterovirus 71 strain GX/LZ 08-04/08/CHN, complete genome	580	`_..................`	597	94
GQ994988.1	Human enterovirus 71 strain Anhui1-09-China, complete genome	580	`_..................`	597	94
GQ994988.1	Human enterovirus 71 strain Anhui1-09-China, complete genome	1043	`..a.t..g.........__`	1059	73
GQ994989.1	Human enterovirus 71 strain Chongqing1-09-China, complete genome	581	`_..................`	598	94
GQ994990.1	Human enterovirus 71 strain Chongqing2-09-China, complete genome	580	`_..................`	597	94
GQ994990.1	Human enterovirus 71 strain Chongqing2-09-China, complete genome	1043	`..a.t..g.........__`	1059	73
GQ994991.1	Human enterovirus 71 strain Chongqing3-09-China, complete genome	580	`_..................`	597	94
GQ994992.1	Human enterovirus 71 strain Henan2-09-China, complete genome	572	`_..................`	589	94
GU196833.1	Human enterovirus 71 strain Henan1-09-China polyprotein gene, complet	392	`_..................`	409	94
GU366191.1	Human enterovirus 71 strain Henan10-08-China, complete genome	580	`_..................`	597	94
GU396280.1	Human enterovirus 71 isolate EV71/Lanzhou01, complete genome	580	`_..................`	597	94
GU459070.1	Human enterovirus 71 isolate FY23-K12, complete genome	583	`_..................`	600	94
GU459071.1	Human enterovirus 71 isolate FY23-K14, complete genome	580	`_..................`	597	94
GU434678.1	Human enterovirus 71 strain EV71-Hubei-09-China, complete genome	583	`_..................`	600	94
HM003207.1	Human enterovirus 71 strain 87-2008 Xi'an Shaanxi, complete genome	580	`_..................`	597	94
HM003207.1	Human enterovirus 71 strain 87-2008 Xi'an Shaanxi, complete genome	1043	`..a.t..g.........__`	1059	73
GQ279368.1	Human coxsackievirus A16 strain SZ/HK08-3, complete genome	585	`_..................`	602	94
GQ279369.1	Human enterovirus 71 strain SZ/HK08-5, complete genome	580	`_..................`	597	94
GQ279369.1	Human enterovirus 71 strain SZ/HK08-5, complete genome	1043	`..a.t..g.........__`	1059	73
GQ279370.1	Human enterovirus 71 strain SZ/HK08-6, complete genome	580	`_..................`	597	94
GQ279371.1	Human coxsackievirus A16 strain SZ/HK08-7, complete genome	585	`_..................`	602	94
HM002484.1	Human enterovirus 71 strain BJ67, complete genome	580	`_..................`	597	94
HM002485.1	Human enterovirus 71 strain BJ97, complete genome	580	`_..................`	597	94
HM002486.1	Human enterovirus 71 strain BJ110, complete genome	581	`_..................`	598	94
HM002487.1	Human enterovirus 71 strain BJ303, complete genome	581	`_..................`	598	94
HM002488.1	Human enterovirus 71 strain BJ366, complete genome	580	`_..................`	597	94
HM002489.1	Human enterovirus 71 strain BJ398, complete genome	581	`_..................`	598	94
HM053669.1	Human enterovirus 71 strain BJ293, complete genome	580	`_..................`	597	94
HM053670.1	Human enterovirus 71 strain BJ393, complete genome	580	`_..................`	597	94
HM053671.1	Human enterovirus 71 strain BJ462, complete genome	580	`_..................`	597	94
HQ189392.1	Human enterovirus 71 isolate HUN/1978, complete genome	585	`_..................`	602	94
HQ189392.1	Human enterovirus 71 isolate HUN/1978, complete genome	1048	`..a.t..g.........__`	1064	73
HQ407557.1	Human enterovirus 71 strain LN009, complete genome	580	`_..................`	597	94
HQ407557.1	Human enterovirus 71 strain LN009, complete genome	6905	`....t.........a..._`	6922	84
AB550332.1	Human enterovirus 71 genomic RNA, complete genome, strain: 1095-org	582	`_..................`	599	94
AB550332.1	Human enterovirus 71 genomic RNA, complete genome, strain: 1095-org	2550	`...........________`	2540	57
AB550333.1	Human enterovirus 71 genomic RNA, complete genome, strain: 1095-LPS1	582	`_..................`	599	94
AB550333.1	Human enterovirus 71 genomic RNA, complete genome, strain: 1095-LPS1	2550	`...........________`	2540	57
AB550334.1	Human enterovirus 71 genomic RNA, complete genome, strain: SK-EV006-o	583	`_..................`	600	94
AB550335.1	Human enterovirus 71 genomic RNA, complete genome, strain: SK-EV006-L	583	`_..................`	600	94
AB550336.1	Human enterovirus 71 genomic RNA, complete genome, strain: C7/Osaka-o	585	`_..................`	602	94
AB550337.1	Human enterovirus 71 genomic RNA, complete genome, strain: C7/Osaka-L	585	`_..................`	602	94
AB550338.1	Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat	579	`_..................`	596	94
AB550339.1	Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat	579	`_..................`	596	94
AB550340.1	Human enterovirus 71 genomic RNA, complete genome, strain: KED005-org	582	`_..................`	599	94
AB550341.1	Human enterovirus 71 genomic RNA, complete genome, strain: KED005-LPS	582	`_..................`	599	94
HQ188292.1	Human enterovirus 71 strain Fuyang-0805a, complete genome	583	`_..................`	600	94
HQ426649.1	Human enterovirus 71 strain 2010FJLY008, complete genome	578	`_..................`	595	94
HQ325852.1	Human enterovirus 71 strain EV71/HENAN/DC/2010, complete genome	581	`_..................`	598	94
AB575911.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100	519	`_..................`	536	94
AB575911.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100	982	`..a.t..g.........__`	998	73
AB575913.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 119	510	`_..................`	527	94
AB575913.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 119	973	`..a.t..g.........__`	989	73
AB575914.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 170	519	`_..................`	536	94
AB575914.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 170	982	`..a.t..g.........__`	998	73
AB575915.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 944	530	`_..................`	547	94
AB575916.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 161	521	`_..................`	538	94
AB575916.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 161	984	`..a.t..g.........__`	1000	73
AB575918.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 205	521	`_..................`	538	94
AB575923.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 202	527	`_..................`	544	94
AB575927.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 113	520	`_..................`	537	94
AB575928.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 115	521	`_..................`	538	94
AB575935.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 480	526	`_..................`	543	94
AB575936.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 961	521	`_..................`	538	94
AB575937.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 141	494	`_..................`	511	94
AB575938.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100	555	`_..................`	572	94
AB575939.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 365	513	`_..................`	530	94
AB575939.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 365	2481	`...........________`	2471	57
AB575941.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 248	521	`_..................`	538	94
AB575941.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 248	2489	`...........________`	2479	57
AB575942.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 369	516	`_..................`	533	94
AB575942.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 369	2484	`...........________`	2474	57
AB575948.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101	539	`_..................`	556	94
HQ891923.1	Human enterovirus 71 strain Shanghai 27-2009, complete genome	581	`_..................`	598	94
HQ891924.1	Human enterovirus 71 strain Shanghai 28-2009, complete genome	581	`_..................`	598	94
HQ891925.1	Human enterovirus 71 strain Shanghai 36-2009, complete genome	582	`_..................`	599	94
HQ891925.1	Human enterovirus 71 strain Shanghai 36-2009, complete genome	6907	`....t.........a..._`	6924	84
HQ891926.1	Human enterovirus 71 strain Shanghai 51-2009, complete genome	581	`_..................`	598	94
HQ891927.1	Human enterovirus 71 strain Shanghai 64-2009, complete genome	581	`_..................`	598	94
HQ891928.1	Human enterovirus 71 strain Shanghai 117-2009, complete genome	581	`_..................`	598	94
HQ891929.1	Human enterovirus 71 strain Shanghai 118-2009, complete genome	581	`_..................`	598	94
HQ269389.1	Human coxsackievirus A16 isolate XM-CA16-3560, complete genome	585	`_..................`	602	94
HQ400942.1	Human enterovirus 71 HZ08/Hangzhou/2008, complete genome	580	`_..................`	597	94
HQ423141.1	Human coxsackievirus A16 strain KMM/08, complete genome	585	`_..................`	602	94
HQ423142.1	Human enterovirus 71 strain KMM/09, complete genome	580	`_..................`	597	94
HQ423143.1	Human enterovirus 71 strain KM186/09, complete genome	580	`_..................`	597	94
HQ456305.1	Human enterovirus A strain GZ2010-156, complete genome	580	`_..................`	597	94
HQ456306.1	Human enterovirus A strain GZ2010-134, complete genome	580	`_..................`	597	94
HQ456306.1	Human enterovirus A strain GZ2010-134, complete genome	6905	`....t.........a..._`	6922	84
HQ456307.1	Human enterovirus A strain GZ2010-120, complete genome	580	`_..................`	597	94
HQ456307.1	Human enterovirus A strain GZ2010-120, complete genome	6905	`....t.........a..._`	6922	84
HQ456308.1	Human enterovirus A strain GZ2010-118, complete genome	580	`_..................`	597	94
HQ456309.1	Human enterovirus A strain GZ08-831, complete genome	580	`_..................`	597	94
HQ456310.1	Human enterovirus A strain GZ08-530, complete genome	580	`_..................`	597	94
HQ456312.1	Human enterovirus A strain GZ08-520, complete genome	580	`_..................`	597	94
HQ456312.1	Human enterovirus A strain GZ08-520, complete genome	1043	`..a.t..g.........__`	1059	73
HQ456313.1	Human enterovirus A strain GZ2010-95, complete genome	580	`_..................`	597	94
HQ611148.1	Human enterovirus 71 strain AH08/06, complete genome	580	`_..................`	597	94
HQ611148.1	Human enterovirus 71 strain AH08/06, complete genome	6905	`....t.........a..._`	6922	84
HQ611148.1	Human enterovirus 71 strain AH08/06, complete genome	1043	`..a.t..g.........__`	1059	73
EF107098.1	Human enterovirus 68 isolate 37-99 from France, complete genome	578	`...a...............`	596	94
EF107098.1	Human enterovirus 68 isolate 37-99 from France, complete genome	1005	`______...........__`	1015	57
AB601882.1	Human enterovirus 68 gene for polyprotein, complete cds, strain: JPOC	78	`...a...............`	96	94
AB601883.1	Human enterovirus 68 gene for polyprotein, complete cds, strain: JPOC	78	`...a...............`	96	94
AB601883.1	Human enterovirus 68 gene for polyprotein, complete cds, strain: JPOC	502	`_____............__`	513	63
AB601884.1	Human enterovirus 68 gene for polyprotein, complete cds, strain: JPOC	78	`...a...............`	96	94
AB601884.1	Human enterovirus 68 gene for polyprotein, complete cds, strain: JPOC	503	`_____............__`	514	63
AB601885.1	Human enterovirus 68 gene for polyprotein, complete cds, strain: JPOC	78	`...a...............`	96	94
AF111953.2	Human poliovirus 1 isolate CHN-Hebei/91-2, complete genome	579	`.c.................`	597	94
AF111961.2	Human poliovirus 1 isolate CHN-Guangdong/92-2, complete genome	579	`.c.................`	597	94
AF111966.2	Human poliovirus 1 isolate CHN-Hainan/93-2, complete genome	579	`.c.................`	597	94
AF111981.2	Human poliovirus 1 isolate CHN-Fujian/93-8, complete genome	579	`.c.................`	597	94
AF111982.2	Human poliovirus 1 isolate CHN-Yunnan/92, complete genome	579	`.c.................`	597	94
AF111983.3	Human poliovirus 1 isolate CHN-Henan/91-3, complete genome	579	`.c.................`	597	94
AF111983.3	Human poliovirus 1 isolate CHN-Henan/91-3, complete genome	6957	`...at.........c..__`	6973	73
DQ443002.1	Human coxsackievirus A24 isolate DSO-26/2005, complete genome	584	`.c.................`	602	94
AY875692.1	Human coxsackievirus B5 isolate 2000/CSF/KOR, complete genome	585	`_................._`	601	89
AB501330.1	Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-2	583	`_................._`	599	89
AB501331.1	Human echovirus 13 gene for polyprotein, complete cds, strain: I5(1)-	583	`_................._`	599	89
AF316321.2	Enterovirus 5865/sin/000009, complete genome	584	`_................._`	600	89
AF352027.1	Enterovirus 5666/sin/002209, complete genome	584	`_................._`	600	89
DQ452074.1	Human enterovirus 71 strain 804/NO/03, complete genome	584	`__.................`	600	89
AB575912.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 108	534	`__.................`	550	89
AB575912.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 108	996	`..a.t..g.........__`	1012	73
AY928383.1	Human poliovirus 1 isolate d261-2002037607 polyprotein gene, complete	577	`_..a...............`	594	89
EF456706.1	Human poliovirus 1 isolate 7/b/97 nonfunctional polyprotein gene, com	530	`_......g...........`	547	89
X54521.1	Swine vesicular disease virus complete genomic RNA	581	`_.....a............`	598	89
D16364.1	SVDMPS Swine vesicular disease virus gene for polyprotein, complete cd	582	`_.....a............`	599	89
D00435.1	SVDG Swine vesicular disease virus (STRAIN H/3 '76) genomic RNA, compl	582	`_.....a............`	599	89
AF029859.2	Echovirus 1 (strain Farouk / ATCC VR-1038) polyprotein precursor, gen	583	`_..a...............`	600	89
AF268065.1	Swine vesicular disease virus strain NET/1/92, complete genome	582	`_.....a............`	599	89
AY752945.1	Human coxsackievirus B3 strain 0, complete genome	582	`_................t.`	599	89
EU887278.1	Swine vesicular disease virus SVDV01, complete genome	582	`_.....a............`	599	89
EU887279.1	Swine vesicular disease virus SVDV02, complete genome	582	`_.....a............`	599	89
EU887280.1	Swine vesicular disease virus SVDV03, complete genome	582	`_.....a............`	599	89
GU109481.1	Human coxsackievirus B3 strain SSM-CVB3, complete genome	582	`_........c.........`	599	89
GU109481.1	Human coxsackievirus B3 strain SSM-CVB3, complete genome	6878	`...at...a........._`	6895	78
GU109481.1	Human coxsackievirus B3 strain SSM-CVB3, complete genome	6362	`____....ca.........`	6376	68
DQ341365.1	Human enterovirus 71 isolate PP37-MAL-01, complete genome	584	`_..a...............`	601	89
AB575917.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101	536	`_..............a...`	553	89
HQ456311.1	Human enterovirus A strain GZ08-522, complete genome	580	`_...............g..`	597	89
HQ456311.1	Human enterovirus A strain GZ08-522, complete genome	1043	`..a.t..g.........__`	1059	73
JN001860.1	Human enterovirus 71 strain NB/2010/01, complete genome	581	`_...t..............`	598	89
AY426531.1	Human enterovirus 68 strain Fermon, complete genome	577	`...a.....a.........`	595	89
AY426531.1	Human enterovirus 68 strain Fermon, complete genome	1039	`______...........__`	1049	57
AY302544.1	Human echovirus 19 strain Burke complete genome	582	`_.......a........._`	598	84
AY896763.1	Human enterovirus B strain CBV3-18219-02 from Moldova polyprotein gen	558	`_............______`	569	63

VIRsiRNAdb

Database of Viral siRNA / shRNA