../../tmp/servers/virsirnadb/474114257
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1432 | 1 | atgtggaattggacgcgtt | 19 | |
| NC_004281.1 | Mammalian orthoreovirus 3 segment M3, complete sequence | 2039 | ................... | 2057 | 100 |
| AF174384.1 | Reovirus 3 major nonstructural protein mu-NS gene, complete cds | 2045 | ................... | 2063 | 100 |
| EF494440.1 | Mammalian orthoreovirus 3 strain T3D segment M3, complete sequence | 2045 | ................... | 2063 | 100 |
| HM159618.1 | Mammalian orthoreovirus 3 Dearing strain T3D segment M3, complete seq | 2045 | ................... | 2063 | 100 |
| GU991664.1 | Mammalian orthoreovirus 3 isolate R124 segment M3, complete sequence | 2045 | ................... | 2063 | 100 |
| GU991674.1 | Mammalian orthoreovirus 3 isolate Q2R segment M3, complete sequence | 2045 | ................... | 2063 | 100 |
| NC_004281.1 | Mammalian orthoreovirus 3 segment M3, complete sequence | 2039 | ................... | 2057 | 100 |
| GU589582.1 | Mammalian orthoreovirus 3 strain Abney segment M3, complete sequence | 2045 | .............t..... | 2063 | 94 |
| NC_013230.1 | Mammalian orthoreovirus 3 segment M3, complete genome | 2045 | ..............a..c. | 2063 | 89 |
| DQ664189.1 | Mammalian orthoreovirus 2 isolate BYD1 segment M3, complete sequence | 2045 | ....a..g........... | 2063 | 89 |
| DQ220019.1 | Reovirus sp. T2W segment S4 sigma 3 protein gene, complete cds | 417 | __..t........._____ | 428 | 57 |
| DQ318037.2 | Mammalian orthoreovirus 2 strain BYD1 segment S4, complete sequence | 471 | ___.c..........____ | 482 | 57 |
| DQ664186.1 | Mammalian orthoreovirus 2 isolate BYD1 segment L3, complete sequence | 3090 | ______..........___ | 3081 | 52 |
| EF029088.1 | Mammalian orthoreovirus isolate SC-A segment L3, complete sequence | 2462 | __.........._______ | 2471 | 52 |
| EF029088.1 | Mammalian orthoreovirus isolate SC-A segment L3, complete sequence | 1373 | ________.c......... | 1383 | 52 |
| NC_013228.1 | Mammalian orthoreovirus 3 segment M2, complete genome | 1974 | _____.........t.___ | 1984 | 52 |
| NC_004278.1 | Mammalian orthoreovirus 3 segment M2, complete sequence | 2007 | _____.........t.___ | 2017 | 52 |
| NC_004278.1 | Mammalian orthoreovirus 3 segment M2, complete sequence | 2007 | _____.........t.___ | 2017 | 52 |
| M20161.1 | REO3OCPMUA Reovirus type 3 Dearing outer capsid protein (mu-1) RNA, co | 2003 | _____.........t.___ | 2013 | 52 |
| U24260.1 | RSU24260 Reovirus type 3 (M2) mRNA, complete cds | 2003 | _____.........t.___ | 2013 | 52 |
| AF368034.1 | Ndelle virus segment M2, complete sequence | 2003 | _____.........t.___ | 2013 | 52 |
| DQ664188.1 | Mammalian orthoreovirus 2 isolate BYD1 segment M2, complete sequence | 2003 | _____.........t.___ | 2013 | 52 |
| EF494439.1 | Mammalian orthoreovirus 3 strain T3D segment M2, complete sequence | 2003 | _____.........t.___ | 2013 | 52 |
| GU196310.1 | Mammalian orthoreovirus 2 segment M2 u1 protein gene, complete cds | 2001 | _____.........t.___ | 2011 | 52 |
| GU589581.1 | Mammalian orthoreovirus 3 strain Abney segment M2, complete sequence | 2007 | _____.........t.___ | 2017 | 52 |
| HM159617.1 | Mammalian orthoreovirus 3 Dearing strain T3D segment M2, complete seq | 2007 | _____.........t.___ | 2017 | 52 |
| GU991663.1 | Mammalian orthoreovirus 3 isolate R124 segment M2, complete sequence | 2006 | _____.........t.___ | 2016 | 52 |
| GU991673.1 | Mammalian orthoreovirus 3 isolate Q2R segment M2, complete sequence | 2003 | _____.........t.___ | 2013 | 52 |
| HQ642773.1 | Mammalian orthoreovirus strain MRV-HLJ/2007 mu-1 protein gene, comple | 1995 | _____.........t.___ | 2005 | 52 |
| AY428872.1 | Mammalian orthoreovirus 1 strain Netherlands 84 minor core protein mu | 1107 | __________......... | 1115 | 47 |