../../tmp/servers/virsirnadb/290202650
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1710 | 1 | cacttcactgcaagacata | 19 | |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 170 | ................... | 188 | 100 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 3106 | _____............c. | 3119 | 68 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 609 | _____..t.........._ | 621 | 63 |
| NC_004500.1 | Human papillomavirus type 92, complete genome | 2587 | ..a.g............__ | 2603 | 78 |
| NC_004500.1 | Human papillomavirus type 92, complete genome | 730 | _____.t.........c.. | 743 | 63 |
| NC_014469.1 | Gammapapillomavirus HPV127, complete genome | 2557 | _...g..........a.._ | 2573 | 78 |
| NC_014469.1 | Gammapapillomavirus HPV127, complete genome | 425 | ___..t.........tt.. | 440 | 68 |
| NC_001596.1 | Human papillomavirus type 9, complete genome | 2699 | ..a.g..........g.__ | 2715 | 73 |
| NC_004195.1 | Bovine papillomavirus type 5, complete genome | 5158 | ____.........c...c. | 5172 | 68 |
| NC_004195.1 | Bovine papillomavirus type 5, complete genome | 2095 | ____.a.a.........__ | 2083 | 57 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 2344 | __...........a.t.__ | 2330 | 68 |
| NC_003348.1 | Phocoena spinipinnis papillomavirus, complete genome | 1209 | ____...........g.g. | 1223 | 68 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 785 | ___...g.........___ | 773 | 63 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 4477 | _____..t.........c. | 4490 | 63 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 5554 | _______..........__ | 5545 | 52 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 1161 | ________........... | 1171 | 57 |
| NC_008298.1 | Rousettus aegyptiacus papillomavirus type 1, complete genome | 7589 | _.t.a..t.........__ | 7574 | 68 |
| NC_007150.1 | Procyon lotor papillomavirus 1, complete genome | 7725 | .t..a.g.........___ | 7710 | 68 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 358 | _.g.........c.g..__ | 373 | 68 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 5160 | _________.......... | 5169 | 52 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 5679 | ___..........ag..__ | 5666 | 63 |
| NC_001605.1 | Mastomys natalensis papillomavirus, complete genome | 2789 | ____..t.........t._ | 2776 | 63 |
| NC_013237.1 | Canine papillomavirus 6, complete genome | 1276 | _____.........t.t.. | 1263 | 63 |
| NC_012486.1 | Human papillomavirus type 112, complete genome | 5990 | .t.a.........._____ | 5977 | 63 |
| NC_008582.1 | Old World harvest mouse papillomavirus, complete genome | 2976 | _..........t.______ | 2965 | 57 |
| NC_008582.1 | Old World harvest mouse papillomavirus, complete genome | 1254 | ________.........._ | 1245 | 52 |
| NC_010329.1 | Human papillomavirus type 88, complete genome | 2573 | ___.g..........____ | 2584 | 57 |
| NC_012123.1 | Equine papillomavirus 2, complete genome | 425 | ___.a..........____ | 436 | 57 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 4357 | _______.........c.. | 4368 | 57 |
| NC_010739.1 | Ursus maritimus papillomavirus 1, complete genome | 113 | ______.........a.._ | 124 | 57 |
| NC_010739.1 | Ursus maritimus papillomavirus 1, complete genome | 2419 | ___.g..........____ | 2430 | 57 |
| NC_010739.1 | Ursus maritimus papillomavirus 1, complete genome | 6231 | ________.........._ | 6240 | 52 |
| NC_015268.1 | Camelus dromedarius papillomavirus type 2, complete genome | 6745 | _______..........a. | 6734 | 57 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 5920 | _____..........____ | 5911 | 52 |
| NC_010226.1 | Canine papillomavirus 4, complete genome | 6855 | ..tc.a.t.t......... | 6873 | 73 |
| NC_004104.1 | Human papillomavirus type 90, complete genome | 1112 | _______..........__ | 1121 | 52 |
| NC_014953.1 | Human papillomavirus type 129, complete genome | 1346 | ___..........______ | 1337 | 52 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 6587 | ________.........._ | 6596 | 52 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 6593 | ..gg..ta.........__ | 6609 | 68 |