../../tmp/servers/virsirnadb/1700491363
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1734 | 1 | cagaaaaacttagacacct | 19 | |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 448 | ................... | 466 | 100 |
| NC_001352.1 | Human papillomavirus - 2, complete genome | 312 | ...g............___ | 327 | 78 |
| NC_001352.1 | Human papillomavirus - 2, complete genome | 7138 | __.........tc..____ | 7126 | 57 |
| NC_004068.1 | Fringilla coelebs papillomavirus, complete genome | 5751 | .........a.....____ | 5765 | 73 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 5014 | _.........agt...... | 5031 | 78 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 4034 | _...c........._____ | 4046 | 63 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 2206 | _..........._______ | 2196 | 57 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 7310 | _________.......... | 7301 | 52 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 6657 | ___..........._____ | 6647 | 57 |
| NC_010739.1 | Ursus maritimus papillomavirus 1, complete genome | 5401 | _.c.g.c..a......... | 5384 | 73 |
| NC_014185.1 | Human papillomavirus 121, complete genome | 1399 | ..........at..a.___ | 1414 | 68 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 4126 | ___.........c.a..__ | 4113 | 63 |
| NC_001531.1 | Human papillomavirus - 5, complete genome | 178 | _____..t.........t. | 165 | 63 |
| NC_007612.1 | Bovine papillomavirus 7, complete genome | 1935 | __..........ac..___ | 1948 | 63 |
| NC_009752.1 | Bovine papillomavirus 8, complete genome | 3994 | ____..........a.___ | 3983 | 57 |
| NC_004104.1 | Human papillomavirus type 90, complete genome | 6540 | .........a.._______ | 6529 | 57 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 2888 | .t.........._______ | 2877 | 57 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 6118 | ____.........._____ | 6127 | 52 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 7014 | .........._________ | 7005 | 52 |
| NC_004195.1 | Bovine papillomavirus type 5, complete genome | 1596 | ____.........._____ | 1605 | 52 |
| NC_011531.1 | Chelonia mydas papillomavirus 1, complete genome | 1797 | ____.........._____ | 1788 | 52 |
| NC_001591.1 | Human papillomavirus type 49, complete genome | 7198 | .........._________ | 7207 | 52 |
| NC_001591.1 | Human papillomavirus type 49, complete genome | 2528 | _.c.........t._____ | 2516 | 57 |
| NC_001587.1 | Human papillomavirus type 34, complete genome | 6268 | _________.......... | 6277 | 52 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 4775 | __...g.taa......... | 4759 | 68 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 5917 | .t..cc.c.........__ | 5901 | 68 |
| NC_003748.1 | Equus caballus papillomavirus - 1, complete genome | 5992 | ______.t.........a. | 6004 | 57 |
| NC_004194.1 | Equinus papillomavirus, complete genome | 5971 | ______.t.........a. | 5983 | 57 |
| NC_010107.1 | Bandicoot papillomatosis carcinomatosis virus type 1, complete genome | 4076 | _____.........g.t._ | 4088 | 57 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 522 | ______..tg......... | 510 | 57 |
| NC_014954.1 | Human papillomavirus type 131, complete genome | 2029 | ___.........ac..___ | 2017 | 57 |