../../tmp/servers/virsirnadb/1020496531
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1849 | 1 | ccaatagagtccaccagtt | 19 | |
| NC_009334.1 | Human herpesvirus 4, complete genome | 169799 | ................... | 169817 | 100 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 77857 | ______.t........... | 77845 | 63 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 86685 | ___.........c..____ | 86674 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 92059 | _..c.........______ | 92048 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 111745 | _______..........__ | 111754 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 154223 | _______..........__ | 154214 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 3392 | __.g.t.........____ | 3380 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 48458 | .........c.g.______ | 48446 | 57 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 13281 | ______.g.........__ | 13291 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 16351 | ______.g.........__ | 16361 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 19421 | ______.g.........__ | 19431 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 22491 | ______.g.........__ | 22501 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 25561 | ______.g.........__ | 25571 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 28631 | ______.g.........__ | 28641 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 31701 | ______.g.........__ | 31711 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 34771 | ______.g.........__ | 34781 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 103786 | ________.........g. | 103776 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 156018 | _____.a.........___ | 156028 | 52 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 60074 | ________.........__ | 60082 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 77965 | _________........._ | 77957 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 103055 | ______.........____ | 103063 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 103339 | __.........________ | 103347 | 47 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 121471 | ____.........______ | 121463 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 77741 | ______.t........... | 77729 | 63 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 91147 | _..c.........______ | 91136 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 110834 | _______..........__ | 110843 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 3392 | __.g.t.........____ | 3380 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 48277 | .........c.g.______ | 48265 | 57 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 13334 | ______.g.........__ | 13344 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 16407 | ______.g.........__ | 16417 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 19480 | ______.g.........__ | 19490 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 22553 | ______.g.........__ | 22563 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 25626 | ______.g.........__ | 25636 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 28699 | ______.g.........__ | 28709 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 31772 | ______.g.........__ | 31782 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 34845 | ______.g.........__ | 34855 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 102874 | ________.........g. | 102864 | 52 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 59968 | ________.........__ | 59976 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 102143 | ______.........____ | 102151 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 102427 | __.........________ | 102435 | 47 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 120563 | ____.........______ | 120555 | 47 |