../../tmp/servers/virsirnadb/234993421
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1718 | 1 | ccacaacgtcacacaatgt | 19 | |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 755 | ................... | 773 | 100 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 4448 | ____.............__ | 4460 | 68 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 912 | _______.a.......... | 901 | 57 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 449 | ___.c...g........._ | 435 | 68 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 574 | _______..a......... | 563 | 57 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 3512 | _________.......... | 3503 | 52 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 4180 | .t.t...tat......... | 4198 | 73 |
| NC_001694.1 | Human papillomavirus - 61, complete genome | 7416 | __...gg..........__ | 7402 | 68 |
| NC_001694.1 | Human papillomavirus - 61, complete genome | 5536 | .t..c.a.gt......... | 5554 | 73 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 839 | ....gca.g........._ | 822 | 73 |
| NC_001352.1 | Human papillomavirus - 2, complete genome | 4159 | ____..tc.........._ | 4146 | 63 |
| NC_001619.1 | Canine oral papillomavirus, complete genome | 3982 | _____..ta.......... | 3969 | 63 |
| NC_012213.1 | Human papillomavirus type 108, complete genome | 917 | _____.g.a.......... | 904 | 63 |
| NC_012213.1 | Human papillomavirus type 108, complete genome | 4081 | _____..cc.......... | 4068 | 63 |
| NC_013236.1 | Canine papillomavirus 5, complete genome | 348 | __..........tt..___ | 335 | 63 |
| NC_004197.1 | Bovine papillomavirus 3, complete genome | 5399 | _______..........a. | 5410 | 57 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 4977 | ____.........._____ | 4986 | 52 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 6946 | ________.........._ | 6955 | 52 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 5984 | _________.......... | 5993 | 52 |
| NC_008298.1 | Rousettus aegyptiacus papillomavirus type 1, complete genome | 4666 | .........._________ | 4657 | 52 |
| NC_008298.1 | Rousettus aegyptiacus papillomavirus type 1, complete genome | 7308 | _________.......... | 7299 | 52 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 6631 | _________.......... | 6622 | 52 |
| NC_014953.1 | Human papillomavirus type 129, complete genome | 1527 | _______..........__ | 1518 | 52 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 1665 | ________.........._ | 1656 | 52 |
| NC_001690.1 | Human papillomavirus type 48, complete genome | 4807 | __...tgt.........__ | 4821 | 63 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 675 | ___.g.g.g........._ | 661 | 63 |