../../tmp/servers/virsirnadb/1600956563
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1949 | 1 | ccggttggtgaggttaatt | 19 | |
| AF266287.1 | Measles virus strain Edmonston (Moraten vaccine), complete genome | 266 | ................... | 284 | 100 |
| AF266287.1 | Measles virus strain Edmonston (Moraten vaccine), complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AF266291.1 | Measles virus strain Edmonston (Schwarz vaccine), complete genome | 266 | ................... | 284 | 100 |
| AF266291.1 | Measles virus strain Edmonston (Schwarz vaccine), complete genome | 9941 | ______..g........._ | 9952 | 57 |
| BD137595.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | ................... | 284 | 100 |
| BD137595.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| S58435.1 | nucleocapsid protein...large protein [measles virus, AIK-C, Genomic R | 266 | .........c......... | 284 | 94 |
| S58435.1 | nucleocapsid protein...large protein [measles virus, AIK-C, Genomic R | 9941 | ______..g........._ | 9952 | 57 |
| K01711.1 | MEANPCG Measles virus (strain Edmonston), complete genome | 267 | .........c......... | 285 | 94 |
| K01711.1 | MEANPCG Measles virus (strain Edmonston), complete genome | 9941 | ______..g........._ | 9952 | 57 |
| Z66517.1 | Measles virus (strain Edmonston B) RNA (infectious cDNA clone) | 266 | .........c......... | 284 | 94 |
| Z66517.1 | Measles virus (strain Edmonston B) RNA (infectious cDNA clone) | 9941 | ______..g........._ | 9952 | 57 |
| E04903.1 | DNA coding measles vaccine peptide | 266 | .........c......... | 284 | 94 |
| E04903.1 | DNA coding measles vaccine peptide | 9941 | ______..g........._ | 9952 | 57 |
| AB012948.1 | Measles virus genomic RNA, complete sequence of wild-type strain, vir | 266 | .........c......... | 284 | 94 |
| AB012948.1 | Measles virus genomic RNA, complete sequence of wild-type strain, vir | 9941 | ______..g........._ | 9952 | 57 |
| AB012949.1 | Measles virus genomic RNA, complete sequence of Vero cell-adapted str | 266 | .........c......... | 284 | 94 |
| AB012949.1 | Measles virus genomic RNA, complete sequence of Vero cell-adapted str | 9941 | ______..g........._ | 9952 | 57 |
| AB032167.1 | Measles virus genomic RNA, complete sequence of Ichinose-Vero strain, | 266 | .........c......... | 284 | 94 |
| AB032167.1 | Measles virus genomic RNA, complete sequence of Ichinose-Vero strain, | 9941 | ______..g........._ | 9952 | 57 |
| AF266286.1 | Measles virus strain Edmonston (AIK-C vaccine), complete genome | 266 | .........c......... | 284 | 94 |
| AF266286.1 | Measles virus strain Edmonston (AIK-C vaccine), complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AF266289.1 | Measles virus strain Edmonston (Rubeovax vaccine), complete genome | 266 | .........c......... | 284 | 94 |
| AF266289.1 | Measles virus strain Edmonston (Rubeovax vaccine), complete genome | 722 | __.........at...___ | 735 | 63 |
| AF266289.1 | Measles virus strain Edmonston (Rubeovax vaccine), complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AF266290.1 | Measles virus strain Edmonston (Zagreb vaccine), complete genome | 266 | .........c......... | 284 | 94 |
| AF266290.1 | Measles virus strain Edmonston (Zagreb vaccine), complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AB046218.1 | Measles virus genomic RNA, complete sequence | 266 | .........c......... | 284 | 94 |
| AB046218.1 | Measles virus genomic RNA, complete sequence | 9941 | ______..g........._ | 9952 | 57 |
| BD137590.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | .........c......... | 284 | 94 |
| BD137590.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| BD137591.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | .........c......... | 284 | 94 |
| BD137591.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| BD137592.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | .........c......... | 284 | 94 |
| BD137592.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| BD137593.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | .........c......... | 284 | 94 |
| BD137593.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| BD137594.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | .........c......... | 284 | 94 |
| BD137594.1 | Mutation causing attenuation of measles virus or human respiratory sy | 722 | __.........at...___ | 735 | 63 |
| BD137594.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| BD137596.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | .........c......... | 284 | 94 |
| BD137596.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| BD137597.1 | Mutation causing attenuation of measles virus or human respiratory sy | 266 | .........c......... | 284 | 94 |
| BD137597.1 | Mutation causing attenuation of measles virus or human respiratory sy | 9941 | ______..g........._ | 9952 | 57 |
| AY486083.1 | Measles virus strain Edmonston-Zagreb master seed, complete genome | 266 | .........c......... | 284 | 94 |
| AY486083.1 | Measles virus strain Edmonston-Zagreb master seed, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AY486084.1 | Measles virus strain Edmonston-Zagreb working seed, complete genome | 266 | .........c......... | 284 | 94 |
| AY486084.1 | Measles virus strain Edmonston-Zagreb working seed, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AY730614.1 | Measles virus strain Leningrad-4, complete genome | 266 | .........c......... | 284 | 94 |
| AY730614.1 | Measles virus strain Leningrad-4, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ227321.1 | Measles virus isolate WA.USA/17.98, complete genome | 266 | .........c......... | 284 | 94 |
| DQ227321.1 | Measles virus isolate WA.USA/17.98, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ227320.1 | Measles virus isolate MVs/Zagreb.CRO/08.03/_SSPE, complete genome | 266 | .........c......... | 284 | 94 |
| DQ227320.1 | Measles virus isolate MVs/Zagreb.CRO/08.03/_SSPE, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ227319.1 | Measles virus isolate 97-45881, complete genome | 266 | .........c......... | 284 | 94 |
| DQ227319.1 | Measles virus isolate 97-45881, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AB254456.1 | Measles virus genomic RNA, complete genome, strain: SSPE-Kobe-1 | 266 | .........c......... | 284 | 94 |
| AB254456.1 | Measles virus genomic RNA, complete genome, strain: SSPE-Kobe-1 | 9941 | ______..g........._ | 9952 | 57 |
| EF033071.1 | Measles virus strain Changchun-47, complete genome | 266 | .........c......... | 284 | 94 |
| EF033071.1 | Measles virus strain Changchun-47, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| EU293548.1 | Measles virus isolate D-V/S, complete genome | 266 | .........c......... | 284 | 94 |
| EU293548.1 | Measles virus isolate D-V/S, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| EU293549.1 | Measles virus isolate D-CEF, complete genome | 266 | .........c......... | 284 | 94 |
| EU293549.1 | Measles virus isolate D-CEF, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| EU293550.1 | Measles virus isolate Davis87, complete genome | 266 | .........c......... | 284 | 94 |
| EU293550.1 | Measles virus isolate Davis87, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| EU293551.1 | Measles virus isolate D-VI, complete genome | 266 | .........c......... | 284 | 94 |
| EU293551.1 | Measles virus isolate D-VI, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| EU293552.1 | Measles virus isolate D-VII, complete genome | 266 | .........c......... | 284 | 94 |
| EU293552.1 | Measles virus isolate D-VII, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| EU435017.1 | Measles virus strain Shanghai-191, complete genome | 266 | .........c......... | 284 | 94 |
| EU435017.1 | Measles virus strain Shanghai-191, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| AB481087.1 | Measles virus genomic RNA, complete genome, strain: T11wild | 266 | .........c......... | 284 | 94 |
| AB481087.1 | Measles virus genomic RNA, complete genome, strain: T11wild | 9941 | ______..g........._ | 9952 | 57 |
| AB481088.1 | Measles virus genomic RNA, complete genome, strain: T11Ve-23 | 266 | .........c......... | 284 | 94 |
| AB481088.1 | Measles virus genomic RNA, complete genome, strain: T11Ve-23 | 9941 | ______..g........._ | 9952 | 57 |
| AF266288.2 | Measles virus strain Edmonston, complete genome | 266 | .........c......... | 284 | 94 |
| AF266288.2 | Measles virus strain Edmonston, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| NC_001498.1 | Measles virus, complete genome | 266 | .........c......... | 284 | 94 |
| NC_001498.1 | Measles virus, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ227318.1 | Measles virus isolate MVs/Zagreb.CRO/47.02/[D6]_SSPE, complete genome | 267 | _........c......... | 284 | 89 |
| DQ227318.1 | Measles virus isolate MVs/Zagreb.CRO/47.02/[D6]_SSPE, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ345721.1 | Measles virus strain CAM-70, complete genome | 266 | .........c....c.... | 284 | 89 |
| DQ345721.1 | Measles virus strain CAM-70, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ345722.1 | Measles virus strain CAM-70, complete genome | 266 | .........c....c.... | 284 | 89 |
| DQ345722.1 | Measles virus strain CAM-70, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ345723.1 | Measles virus strain CAM-70, complete genome | 266 | .........c....c.... | 284 | 89 |
| DQ345723.1 | Measles virus strain CAM-70, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ211902.1 | Measles virus strain MVi/Zhejiang.CHN/7.05/4, complete genome | 9941 | ______..g........._ | 9952 | 57 |
| DQ211902.1 | Measles virus strain MVi/Zhejiang.CHN/7.05/4, complete genome | 12527 | _____.c.a........._ | 12515 | 57 |