../../tmp/servers/virsirnadb/1019464112
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi21881cgtgatgtgtctcggataa19
AJ272108.1 Hepatitis E virus (genotype 4) complete genome sequence 4184...................4202100
AB108537.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate:CCC2204165...................4183100
AB108537.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate:CCC220700.a.........._______71157
GU361892.1 Swine hepatitis E virus strain hb-3, complete genome 4184...................4202100
AB074917.3 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JKK-S4168..............t....418694
AY594199.1 Swine hepatitis E virus strain swCH25, complete genome 4192...........c.......421094
AY594199.1 Swine hepatitis E virus strain swCH25, complete genome 724.a.........._______73557
AB197674.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYI-ChiSai014181...........c.......419994
AB197674.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYI-ChiSai01716.a.........._______72757
AB220972.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
AB220973.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
AB220975.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
AB220976.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
AB220977.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
AB220978.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
AB220979.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
EF077630.1 Hepatitis E virus isolate Ch-S-1, complete genome 4181...........c.......419994
DQ279091.2 Swine hepatitis E virus isolate swDQ, complete genome 4179..............a....419794
DQ279091.2 Swine hepatitis E virus isolate swDQ, complete genome 717.a.........._______72857
EU366959.1 Hepatitis E virus isolate swGX32, complete genome 4185...........c.......420394
AB369688.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, strain: E4161.....c.............417994
EU676172.2 Swine hepatitis E virus isolate swGX40, complete genome 4178...........c.......419694
EU676172.2 Swine hepatitis E virus isolate swGX40, complete genome 716.a.........._______72757
AB291959.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JTC-K4144..............t....416294
AB291965.1 Hepatitis E virus genomic RNA, complete genome, isolate: HRC-HE14C 4184..............t....420294
AB291966.1 Hepatitis E virus genomic RNA, complete genome, isolate: JST-KitAsa044184..............t....420294
AB291967.1 Hepatitis E virus genomic RNA, complete genome, isolate: JKO-Aba-FH064184..............t....420294
AB291968.1 Hepatitis E virus genomic RNA, complete genome, isolate: JMM-Aba06C 4184..............t....420294
AB291968.1 Hepatitis E virus genomic RNA, complete genome, isolate: JMM-Aba06C 2384___...ca.........__237163
AB480825.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184..............t....420294
GU188851.1 Swine hepatitis E virus isolate WH09, complete genome 4184..............t....420294
GU206559.1 Hepatitis E virus isolate bjsw1, complete genome 4184...........c.......420294
GU119961.3 Swine hepatitis E virus isolate CHN-XJ-SW13, complete genome 4185..............t....420394
GU119961.3 Swine hepatitis E virus isolate CHN-XJ-SW13, complete genome 717.a.........._______72857
HQ634346.1 Hepatitis E virus strain TW6196E, complete genome 4182...........c.......420094
AB080575.1 Hepatitis E virus genomic RNA, complete genome, isolate: HE-JI4 4115...........a..t....413389
AB074915.3 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JAK-S4168...........g..t....418689
AB091395.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSN-S4168...........a..t....418689
AB097811.1 Swine hepatitis E virus genomic RNA, complete genome, isolate: swJ13-4184...........a..t....420289
AB097812.1 Hepatitis E virus genomic RNA, complete genome, isolate: HE-JA1 4184...........a..t....420289
AB099347.1 Hepatitis E virus genomic RNA, complete genome, isolate: HE-JK4 4184...........a..t....420289
AY723745.1 Hepatitis E virus isolate IND-SW-00-01, complete genome 4184...........c..a....420289
AY723745.1 Hepatitis E virus isolate IND-SW-00-01, complete genome 716.a.........._______72757
AB200239.1 Hepatitis E virus genomic RNA, complete genome, isolate: JSN-Sap-FH024185...........a..t....420389
AB193176.1 Hepatitis E virus genomic RNA, complete genome, isolate: JSF-Tot03C 4185...........a..t....420389
AB193177.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYN-Sap01C 4185...........a..t....420389
AB193178.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYN-Nii02L 4159...........a..t....417789
AB197673.1 Hepatitis E virus genomic RNA, complete genome, isolate: JKO-ChiSai984182...........c..a....420089
AB220971.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, isolate: 4184...........a..t....420289
AB253420.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate:HEVN2 4159...........c..a....417789
AB291964.1 Hepatitis E virus genomic RNA, complete genome, isolate: JYK-Tok03C 4179...........c..a....419789
AB481227.1 Swine hepatitis E virus genomic RNA, complete genome, isolate: swJB-H4184...........a..t....420289
FJ763142.1 Hepatitis E virus isolate KNIH-hHEV4, complete genome 4181...........c..a....419989
GU119960.2 Swine hepatitis E virus isolate CHN-XJ-SW33, complete genome 4181...........c..a....419989
GU937805.1 Hepatitis E virus isolate ch-bj-n1, complete genome 4229..............ag...424789
GU937805.1 Hepatitis E virus isolate ch-bj-n1, complete genome 5044__..t........._____505557
AF076239.3 Hepatitis E virus from Hyderabad, India, complete genome 4144...........ca....c.416284
AF459438.1 Hepatitis E virus from North India, complete genome 4144...........ca....c.416284
AB291963.1 Hepatitis E virus genomic RNA, complete genome, isolate: JRM-Toy05C 1568.t..........g...___158373
AB091394.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JJT-K6630_____.a..........._664263
AB091394.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JJT-K1550.t.........gg...___156568
AB189070.1 Hepatitis E virus genomic RNA, complete genome, isolate: JBOAR1-Hyo046649_____.a..........._666163
AB189071.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JDEER6632_____.a..........._664463
AB189072.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy6623_____.a..........._663563
AB189073.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy6623_____.a..........._663563
AB189074.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy6623_____.a..........._663563
AB189075.1 Hepatitis E virus genes for nonstructural protein, capsid protein, hy6623_____.a..........._663563
AB222182.1 Hepatitis E virus genomic RNA, complete genome, isolate: wbJSG1 6648_____.a..........._666063
AB222184.1 Hepatitis E virus genomic RNA, complete genome, isolate: wbJYG1 6648_____.a..........._666063
AB246676.1 Hepatitis E virus genomic RNA, complete genome, isolate:HEVN1 6648_____.a..........._666063
AB369691.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, strain: E6628_____.a..........._664063
AB443623.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s6623_____.a..........._663563
AB443623.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s1543.t.........gg...___155868
AB443624.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s6623_____.a..........._663563
AB443624.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s1543.t.........gg...___155868
AB443625.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s6623_____.a..........._663563
AB443625.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s1543.t.........gg...___155868
AB443626.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s6623_____.a..........._663563
AB443626.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s1543.t.........gg...___155868
AB443627.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s6623_____.a..........._663563
AB443627.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-s1543.t.........gg...___155868
AB291951.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-S6628_____.a..........._664063
AB291951.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIO-S1548.t.........gg...___156368
AB291952.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIY-T6628_____.a..........._664063
AB291952.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JIY-T1548.t.........gg...___156368
AB291953.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSO-O6628_____.a..........._664063
AB291953.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSO-O1548.t.........gg...___156368
AB291954.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSS-O6628_____.a..........._664063
AB291954.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSS-O1548.t.........gg...___156368
AB291955.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSW-K6628_____.a..........._664063
AB291955.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JSW-K1548.t.........gg...___156368
AB291956.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JYM-T6628_____.a..........._664063
AB291956.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JYM-T1548.t.........gg...___156368
AB291957.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JYU-O6628_____.a..........._664063
AB291957.1 Hepatitis E virus genomic RNA, nearly complete genome, isolate: JYU-O1548.t.........gg...___156368
AB291960.1 Hepatitis E virus genomic RNA, complete genome, isolate: JTK-Kag06C 6649_____.a..........._666163
AB291960.1 Hepatitis E virus genomic RNA, complete genome, isolate: JTK-Kag06C 1569.t.........gg...___158468
AB481229.1 Swine hepatitis E virus genomic RNA, complete genome, isolate: swJR-P6648_____.a..........._666063
FJ527832.2 Hepatitis E virus isolate SAAS-JDY5, complete genome 6646_____.a..........._665863
FJ705359.1 Hepatitis E virus isolate wbGER27, complete genome 6648_____.a..........._666063
AP003430.1 Hepatitis E virus genomic RNA, complete genome, isolate: JRA1 1569.t.........gg...___158468
AB222183.1 Hepatitis E virus genomic RNA, complete genome, isolate: wbJTS1 1568.t.........gg...___158368
AB301710.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 1568.t.........gg...___158368
AB301710.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 4987__..t........._____499857
AB301710.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 6651________.........._666052
AB362843.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p1568.t.........gg...___158368
AB362843.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p4987__..t........._____499857
AB362843.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p6651________.........._666052
AB362842.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p1568.t.........gg...___158368
AB362842.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p4987__..t........._____499857
AB362842.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p6651________.........._666052
AB362841.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p1568.t.........gg...___158368
AB362841.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p4987__..t........._____499857
AB362841.1 Hepatitis E virus genomic RNA, complete genome, isolate: JE03-1760F_p6651________.........._666052
AB362840.1 Hepatitis E virus genomic RNA, complete genome, isolate: 114d/A549 1568.t.........gg...___158368
AB362840.1 Hepatitis E virus genomic RNA, complete genome, isolate: 114d/A549 4987__..t........._____499857
AB362840.1 Hepatitis E virus genomic RNA, complete genome, isolate: 114d/A549 6651________.........._666052
AB362839.1 Hepatitis E virus genomic RNA, complete genome, isolate: 118d/Alex 1568.t.........gg...___158368
AB362839.1 Hepatitis E virus genomic RNA, complete genome, isolate: 118d/Alex 4987__..t........._____499857
AB362839.1 Hepatitis E virus genomic RNA, complete genome, isolate: 118d/Alex 6651________.........._666052
AB425831.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 1568.t.........gg...___158368
AB425831.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 4987__..t........._____499857
AB425830.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 1568.t.........gg...___158368
AB425830.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 4987__..t........._____499857
AB425830.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 6651________.........._666052
AB437316.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 1568.t.........gg...___158368
AB437316.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 4987__..t........._____499857
AB437316.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 6651________.........._666052
AB437319.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 1210.t.........gg...___122568
AB437319.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 4629__..t........._____464057
AB437319.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 6293________.........._630252
AB437317.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 1568.t.........gg...___158368
AB437317.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 4987__..t........._____499857
AB437317.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 6652________.........._666152
AB437318.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 1568.t.........gg...___158368
AB437318.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 4987__..t........._____499857
AB437318.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, isolate: 6651________.........._666052
AY115488.1 Swine hepatitis E virus strain Arkell, complete genome 5003__..t........._____501457
AF455784.1 Hepatitis E virus strain Osh 205, complete genome 719.a.........._______73057
AB248522.1 Hepatitis E virus genomic RNA, complete genome, isolate: swJ12-4 716.a.........._______72757
EU375463.1 Hepatitis E virus isolate Thai-swHEV07, complete genome 717.a.........._______72857
AB369687.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, strain: E696.a.........._______70757
AB369689.1 Hepatitis E virus genomic RNA, complete genome, genotype 3, strain: E4967__..t........._____497857
AB369690.1 Hepatitis E virus genomic RNA, complete genome, genotype 4, strain: E717.a.........._______72857
AB291961.1 Hepatitis E virus genomic RNA, complete genome, isolate: JMH-Osa04C 717.a.........._______72857
AB291961.1 Hepatitis E virus genomic RNA, complete genome, isolate: JMH-Osa04C 4893_________..........488452
FJ610232.1 Swine hepatitis E virus isolate swCH189, complete genome 717.a.........._______72857
FJ906896.1 Hepatitis E virus isolate GDC46, complete genome 717.a.........._______72857
FJ906896.1 Hepatitis E virus isolate GDC46, complete genome 5042__..t........._____505357
HM439284.1 Hepatitis E virus isolate EChZ20, complete genome 716.a.........._______72757