../../tmp/servers/virsirnadb/1974772875
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1702 | 1 | ctaactaacactgggttat | 19 | |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 381 | ................... | 399 | 100 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 6112 | ______.........c.._ | 6123 | 57 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 4624 | ..c.a.........a..c. | 4606 | 78 |
| NC_001458.1 | Human papillomavirus type 63, complete genome | 4917 | _.t..a..........g._ | 4933 | 73 |
| NC_001524.1 | European elk papillomavirus, complete genome | 7232 | ______.........a... | 7244 | 63 |
| NC_001693.1 | Human papillomavirus type 60, complete genome | 1390 | ______..a.......... | 1402 | 63 |
| NC_001693.1 | Human papillomavirus type 60, complete genome | 5903 | ______.........a... | 5915 | 63 |
| NC_008519.1 | Mastomys coucha papillomavirus 2, complete genome | 1264 | __...........______ | 1254 | 57 |
| NC_014143.1 | Bettongia penicillata papillomavirus 1, complete genome | 3583 | _______..........._ | 3573 | 57 |
| NC_014143.1 | Bettongia penicillata papillomavirus 1, complete genome | 3568 | _______..........__ | 3559 | 52 |
| NC_008582.1 | Old World harvest mouse papillomavirus, complete genome | 1595 | __..aa..........a._ | 1610 | 68 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 868 | __..gc.........a.._ | 883 | 68 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 4030 | ___..........ct..__ | 4043 | 63 |
| NC_006564.1 | Canine papillomavirus 2, complete genome | 4528 | ____..........t.g._ | 4515 | 63 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 5761 | _______.........a.. | 5750 | 57 |
| NC_013237.1 | Canine papillomavirus 6, complete genome | 4174 | .........t.._______ | 4185 | 57 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 6101 | ______.........c.._ | 6112 | 57 |
| NC_004197.1 | Bovine papillomavirus 3, complete genome | 5938 | _____.g..........__ | 5949 | 57 |
| NC_001596.1 | Human papillomavirus type 9, complete genome | 6244 | ______.........a.._ | 6255 | 57 |
| NC_001596.1 | Human papillomavirus type 9, complete genome | 4102 | .........._________ | 4111 | 52 |
| NC_001596.1 | Human papillomavirus type 9, complete genome | 4120 | .........._________ | 4129 | 52 |
| NC_001690.1 | Human papillomavirus type 48, complete genome | 3587 | __.........._______ | 3578 | 52 |
| NC_004195.1 | Bovine papillomavirus type 5, complete genome | 7571 | _________.......... | 7562 | 52 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 6050 | __.........._______ | 6041 | 52 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 4838 | ______..ag......... | 4826 | 57 |
| NC_013035.1 | Human papillomavirus 116, complete genome | 5203 | ____.........._____ | 5212 | 52 |
| NC_014955.1 | Human papillomavirus type 132, complete genome | 4613 | __.........._______ | 4622 | 52 |
| NC_015268.1 | Camelus dromedarius papillomavirus type 2, complete genome | 4428 | ______..........___ | 4437 | 52 |
| NC_001619.1 | Canine oral papillomavirus, complete genome | 6184 | __.t.a..gg......... | 6168 | 68 |
| NC_001352.1 | Human papillomavirus - 2, complete genome | 2380 | ____.c.........g.g. | 2366 | 63 |
| NC_013236.1 | Canine papillomavirus 5, complete genome | 5471 | ____.a..ag......... | 5457 | 63 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 4853 | ____.........cta... | 4839 | 63 |
| NC_001541.1 | Cottontail rabbit papillomavirus, complete genome | 1872 | __.g.........t.____ | 1860 | 57 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 2182 | ______.........a.c. | 2194 | 57 |
| NC_008189.1 | Human papillomavirus type 101, complete genome | 5539 | ______.........a.g. | 5551 | 57 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 6339 | ______.........a.g. | 6351 | 57 |
| NC_001531.1 | Human papillomavirus - 5, complete genome | 489 | ..tc.........______ | 477 | 57 |
| NC_014326.1 | Mus musculus papillomavirus type 1, complete genome | 5865 | ______.........a.g. | 5877 | 57 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 2349 | _.........aa.._____ | 2337 | 57 |
| NC_007612.1 | Bovine papillomavirus 7, complete genome | 1385 | ______.g.........g. | 1397 | 57 |