../../tmp/servers/virsirnadb/652958993
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1795 | 1 | ctaaggacctaacaaagtt | 19 | |
| M33854.1 | CXA3CG Coxsackievirus B3 (CVB3) complete genome | 6314 | ................... | 6332 | 100 |
| M16572.1 | CXA3G Coxsackievirus B3, complete genome | 6313 | ................... | 6331 | 100 |
| M88483.1 | CXAB3CG Coxsackievirus B3 mRNA, complete genome | 6315 | ................... | 6333 | 100 |
| AF231763.1 | Coxsackievirus B3 strain 31-1-93, complete genome | 6315 | ................... | 6333 | 100 |
| AF231764.1 | Coxsackievirus B3 strain P, complete genome | 6315 | ................... | 6333 | 100 |
| AF231765.1 | Coxsackievirus B3 strain PD, complete genome | 6315 | ................... | 6333 | 100 |
| AY752945.1 | Human coxsackievirus B3 strain 0, complete genome | 6315 | ................... | 6333 | 100 |
| AY752946.1 | Human coxsackievirus B3 strain 20, complete genome | 6315 | ................... | 6333 | 100 |
| AY752944.2 | Human coxsackievirus B3 strain 28, complete genome | 6315 | ................... | 6333 | 100 |
| AY896765.1 | Human enterovirus B strain EV7-15936-01 from Azerbaijan polyprotein g | 6318 | .c..............a.. | 6336 | 89 |
| AJ849942.1 | Human echovirus 3 gene for polyprotein, genomic RNA, strain PicoBank/ | 6342 | ..........g..c..... | 6360 | 89 |
| U16283.1 | E6U16283 Echovirus 6 lytic strain, complete genome | 6332 | .c.g.........t..... | 6350 | 84 |
| AF465517.1 | Human echovirus 6 strain Charles, complete genome | 6333 | .c.g.........t..... | 6351 | 84 |
| AY302539.1 | Human echovirus 13 strain Del Carmen complete genome | 6324 | .c...........c..a.. | 6342 | 84 |
| AY302544.1 | Human echovirus 19 strain Burke complete genome | 6348 | .c...........t...c. | 6366 | 84 |
| AY302550.1 | Human echovirus 26 strain Coronel complete genome | 6338 | .c...........c..a.. | 6356 | 84 |
| AY302558.1 | Human echovirus 6 strain D'Amori complete genome | 6333 | .c.g.........t..... | 6351 | 84 |
| AJ577590.1 | Human echovirus 11, isolate FIN-0666, complete virion genome | 6347 | ..........c..c...c. | 6365 | 84 |
| AY843298.1 | Human enterovirus 80 strain USA/CA67-10387, complete genome | 6343 | ..........g..c...c. | 6361 | 84 |
| AY843299.1 | Human enterovirus 81 strain USA/CA68-10389, complete genome | 6330 | ..........g..c...c. | 6348 | 84 |
| AY843307.1 | Human enterovirus 97 strain BAN99-10355, complete genome | 6327 | .c...........g..___ | 6342 | 73 |
| EU147493.1 | Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds | 2040 | ______............_ | 2029 | 63 |
| EU262658.1 | Human coxsackievirus A16 strain shzh05-1, complete genome | 6434 | ............_______ | 6423 | 63 |
| AY302553.1 | Human echovirus 3 strain Morrisey complete genome | 6343 | .c.g.........t...c. | 6361 | 78 |
| AF039205.1 | Coxsackievirus B6 strain Schmitt, complete genome | 6235 | ..ct...........c.__ | 6251 | 73 |
| AF105342.1 | Coxsackievirus B6 strain Schmitt, complete genome | 6235 | ..ct...........c.__ | 6251 | 73 |
| AF114384.1 | Coxsackievirus B6 strain Schmitt, complete genome | 6234 | ..ct...........c.__ | 6250 | 73 |
| AY302557.1 | Human echovirus 4 strain Pesacek complete genome | 3272 | __..........t..____ | 3284 | 63 |
| AY843297.1 | Human enterovirus 79 strain USA/CA79-10384, complete genome | 6793 | _______..........._ | 6783 | 57 |
| AY421760.1 | Human coxsackievirus A2 strain Fleetwood, complete genome | 5947 | ______...........__ | 5957 | 57 |
| AY421761.1 | Human coxsackievirus A3 strain Olson, complete genome | 5944 | ______...........__ | 5954 | 57 |
| AY421764.1 | Human coxsackievirus A6 strain Gdula, complete genome | 5983 | ______...........__ | 5993 | 57 |
| AY421768.1 | Human coxsackievirus A12 strain Texas-12, complete genome | 5953 | ______...........__ | 5963 | 57 |
| DQ341362.1 | Human enterovirus 71 isolate SB12736-SAR-03, complete genome | 5961 | ______...........__ | 5971 | 57 |