../../tmp/servers/virsirnadb/1273768499
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2158 | 1 | ctacttcgaaaaacccagt | 19 | |
| U57056.1 | CXU57056 Coxsackievirus B3 Woodruff variant, complete genome | 246 | ................... | 264 | 100 |
| U57056.1 | CXU57056 Coxsackievirus B3 Woodruff variant, complete genome | 3617 | ..gg....g........._ | 3600 | 78 |
| DQ341363.1 | Human enterovirus 71 isolate S19841-SAR-03, complete genome | 249 | ................... | 267 | 100 |
| X67706.1 | Coxsackievirus B5 complete genome | 249 | .........g......... | 267 | 94 |
| M33854.1 | CXA3CG Coxsackievirus B3 (CVB3) complete genome | 245 | ...............t... | 263 | 94 |
| M16572.1 | CXA3G Coxsackievirus B3, complete genome | 245 | ...............t... | 263 | 94 |
| M88483.1 | CXAB3CG Coxsackievirus B3 mRNA, complete genome | 246 | ...............t... | 264 | 94 |
| X84981.1 | Echovirus 9 (strain Hill), complete genome | 245 | .........g......... | 263 | 94 |
| AF114383.1 | Coxsackievirus B5 strain Faulkner, complete genome | 247 | .........g......... | 265 | 94 |
| AF231763.1 | Coxsackievirus B3 strain 31-1-93, complete genome | 246 | ...............t... | 264 | 94 |
| AF231764.1 | Coxsackievirus B3 strain P, complete genome | 246 | ...............t... | 264 | 94 |
| AF311939.1 | Human coxsackievirus B4 strain E2 variant, complete genome | 248 | ...............t... | 266 | 94 |
| AF311939.1 | Human coxsackievirus B4 strain E2 variant, complete genome | 3523 | ___.........c.a..._ | 3509 | 68 |
| AY302543.1 | Human echovirus 17 strain CHHE-29 complete genome | 247 | ...............t... | 265 | 94 |
| AY302544.1 | Human echovirus 19 strain Burke complete genome | 246 | .........g......... | 264 | 94 |
| AY302549.1 | Human echovirus 25 strain JV-4 complete genome | 245 | ...............t... | 263 | 94 |
| AY302555.1 | Human echovirus 32 strain PR-10 complete genome | 236 | .........g......... | 254 | 94 |
| AY302556.1 | Human echovirus 33 strain Toluca-3 complete genome | 246 | ...............t... | 264 | 94 |
| AY752945.1 | Human coxsackievirus B3 strain 0, complete genome | 246 | ...............t... | 264 | 94 |
| AY752946.1 | Human coxsackievirus B3 strain 20, complete genome | 246 | ...............t... | 264 | 94 |
| AY843299.1 | Human enterovirus 81 strain USA/CA68-10389, complete genome | 243 | ...............t... | 261 | 94 |
| AY843300.1 | Human enterovirus 82 strain USA/CA64-10390, complete genome | 249 | .........g......... | 267 | 94 |
| AY843307.1 | Human enterovirus 97 strain BAN99-10355, complete genome | 246 | .........g......... | 264 | 94 |
| EU147493.1 | Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds | 245 | ...............t... | 263 | 94 |
| AY752944.2 | Human coxsackievirus B3 strain 28, complete genome | 246 | ...............t... | 264 | 94 |
| AY421761.1 | Human coxsackievirus A3 strain Olson, complete genome | 246 | .........g......... | 264 | 94 |
| AY421762.1 | Human coxsackievirus A4 strain High Point, complete genome | 251 | .........g......... | 269 | 94 |
| AY421765.1 | Human coxsackievirus A7 strain Parker, complete genome | 246 | ...............t... | 264 | 94 |
| AY421768.1 | Human coxsackievirus A12 strain Texas-12, complete genome | 249 | .........g......... | 267 | 94 |
| DQ341362.1 | Human enterovirus 71 isolate SB12736-SAR-03, complete genome | 249 | .........g......... | 267 | 94 |
| DQ341364.1 | Human enterovirus 71 isolate 5511-SIN-00, complete genome | 249 | .........g......... | 267 | 94 |
| EU131776.1 | Human enterovirus 71 strain N3340-TW-02, complete genome | 244 | ........g.......... | 262 | 94 |
| FJ461781.1 | Human enterovirus 71 isolate NUH0083/SIN/08, complete genome | 213 | .........g......... | 231 | 94 |
| AB575911.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100 | 184 | .........g......... | 202 | 94 |
| AB575912.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 108 | 197 | .........g......... | 215 | 94 |
| U16283.1 | E6U16283 Echovirus 6 lytic strain, complete genome | 246 | _........g......... | 263 | 89 |
| AF039205.1 | Coxsackievirus B6 strain Schmitt, complete genome | 247 | _........g......... | 264 | 89 |
| AF105342.1 | Coxsackievirus B6 strain Schmitt, complete genome | 247 | _........g......... | 264 | 89 |
| AF114384.1 | Coxsackievirus B6 strain Schmitt, complete genome | 247 | _........g......... | 264 | 89 |
| AY036578.1 | Human echovirus 7 strain UMMC polyprotein gene, complete cds | 246 | _........g......... | 263 | 89 |
| AJ276224.1 | Human echovirus 11 genomic RNA for polyprotein | 247 | _........g......... | 264 | 89 |
| AF465517.1 | Human echovirus 6 strain Charles, complete genome | 247 | _........g......... | 264 | 89 |
| AY843301.1 | Human enterovirus 83 strain USA/CA76-10392, complete genome | 247 | _........g......... | 264 | 89 |
| AY843302.1 | Human enterovirus 77 strain USA/TX97-10394, complete genome | 254 | _..............t... | 271 | 89 |
| AY843305.1 | Human enterovirus 87 strain BAN01-10396, complete genome | 248 | _........g......... | 265 | 89 |
| DQ902712.1 | Human enterovirus 84 isolate CIV2003-10603, complete genome | 249 | _........g......... | 266 | 89 |
| EF174468.1 | Human coxsackievirus B2 isolate KOR 04-243, complete genome | 247 | _........g......... | 264 | 89 |
| EF174469.1 | Human coxsackievirus B2 isolate KOR 04-279, complete genome | 247 | _........g......... | 264 | 89 |
| EF371880.2 | Human enterovirus B isolate SE-03-78616, complete genome | 248 | _..............t... | 265 | 89 |
| EF634316.1 | Human echovirus 11 strain D207, complete genome | 250 | _........g......... | 267 | 89 |
| EF634316.1 | Human echovirus 11 strain D207, complete genome | 4957 | _____.a..........._ | 4969 | 63 |
| EU144042.1 | Human coxsackievirus B3 isolate CVB3-MCH polyprotein gene, complete c | 247 | _........g......... | 264 | 89 |
| FJ000001.1 | Human coxsackievirus B3 strain Fuyang19, complete genome | 246 | _........g......... | 263 | 89 |
| FJ357838.1 | Human coxsackievirus B3 strain GZ803, complete genome | 248 | _........g......... | 265 | 89 |
| GQ141875.1 | Human coxsackievirus B3 strain Beijing0811, complete genome | 248 | _........g......... | 265 | 89 |
| HM185055.1 | Human echovirus 6 strain Echo6/Henan/116/2008, complete genome | 248 | _........g......... | 265 | 89 |
| HM185056.1 | Human enterovirus B strain EVB/Henan/127/2008, complete genome | 225 | _........g......... | 242 | 89 |
| HM777023.1 | Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome | 248 | _........g......... | 265 | 89 |
| AF448783.1 | Human poliovirus 2 strain EGY93-034, complete genome | 244 | .........g..g...... | 262 | 89 |
| X54521.1 | Swine vesicular disease virus complete genomic RNA | 246 | .........g.....t... | 264 | 89 |
| D16364.1 | SVDMPS Swine vesicular disease virus gene for polyprotein, complete cd | 246 | .........g.....t... | 264 | 89 |
| X80059.1 | Echo Virus 11 genomic DNA | 248 | .........g.....t... | 266 | 89 |
| S76772.1 | polyprotein [Coxsackie B4 virus CB4, host=mice, E2, originally derive | 248 | ............c..t... | 266 | 89 |
| S76772.1 | polyprotein [Coxsackie B4 virus CB4, host=mice, E2, originally derive | 3523 | ___.........c.a..._ | 3509 | 68 |
| D00435.1 | SVDG Swine vesicular disease virus (STRAIN H/3 '76) genomic RNA, compl | 246 | .........g.....t... | 264 | 89 |
| AF085363.1 | Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds | 246 | .........g.....t... | 264 | 89 |
| AF162711.1 | Echovirus 30 strain Bastianni, complete genome | 248 | .........g.....t... | 266 | 89 |
| AF081485.1 | Coxsackievirus B2 strain Ohio, complete genome | 245 | .........g.....t... | 263 | 89 |
| AF029859.2 | Echovirus 1 (strain Farouk / ATCC VR-1038) polyprotein precursor, gen | 247 | .........g.....t... | 265 | 89 |
| AF268065.1 | Swine vesicular disease virus strain NET/1/92, complete genome | 246 | .........g.....t... | 264 | 89 |
| AF231765.1 | Coxsackievirus B3 strain PD, complete genome | 246 | ...t...........t... | 264 | 89 |
| AY036579.1 | Human echovirus 7 strain Wallace polyprotein gene, complete cds | 246 | .........g.....t... | 264 | 89 |
| AF311938.1 | Human echovirus 30 strain Bastianni, complete genome | 248 | .........g.....t... | 266 | 89 |
| AF317694.1 | Human echovirus 18 strain Metcalf polyprotein gene, complete cds | 244 | .........g.....t... | 262 | 89 |
| AF465516.1 | Human echovirus 7 strain Wallace, complete genome | 246 | .........g.....t... | 264 | 89 |
| AY302539.1 | Human echovirus 13 strain Del Carmen complete genome | 246 | .........g.....t... | 264 | 89 |
| AY302540.1 | Human echovirus 14 strain Tow complete genome | 245 | .........g.....t... | 263 | 89 |
| AY302541.1 | Human echovirus 15 strain CH 96-51 complete genome | 247 | .........g.....t... | 265 | 89 |
| AY302546.1 | Human echovirus 20 strain JV-1 complete genome | 246 | .........g.....t... | 264 | 89 |
| AY302547.1 | Human echovirus 21 strain Farina complete genome | 246 | .........g.....t... | 264 | 89 |
| AY302547.1 | Human echovirus 21 strain Farina complete genome | 3518 | ___..........._____ | 3528 | 57 |
| AY302548.1 | Human echovirus 24 strain DeCamp complete genome | 246 | .c.......g......... | 264 | 89 |
| AY302550.1 | Human echovirus 26 strain Coronel complete genome | 245 | .........g.....t... | 263 | 89 |
| AY302552.1 | Human echovirus 29 strain JV-10 complete genome | 246 | .........g.....t... | 264 | 89 |
| AY302553.1 | Human echovirus 3 strain Morrisey complete genome | 247 | .........g..g...... | 265 | 89 |
| AY302554.1 | Human echovirus 31 strain Caldwell complete genome | 245 | .........g..g...... | 263 | 89 |
| AY302557.1 | Human echovirus 4 strain Pesacek complete genome | 246 | .........g.....t... | 264 | 89 |
| AY302559.1 | Human echovirus 7 strain Wallace complete genome | 246 | .........g.....t... | 264 | 89 |
| AY302560.1 | Enterovirus 69 strain Toluca-1 complete genome | 248 | .........g.....t... | 266 | 89 |
| AY429470.1 | Swine vesicular disease virus strain HK'70, complete genome | 246 | .........g.....t... | 264 | 89 |
| AY843297.1 | Human enterovirus 79 strain USA/CA79-10384, complete genome | 248 | .........g.....t... | 266 | 89 |
| AY843298.1 | Human enterovirus 80 strain USA/CA67-10387, complete genome | 247 | .........g.....t... | 265 | 89 |
| EU887278.1 | Swine vesicular disease virus SVDV01, complete genome | 246 | .........g.....t... | 264 | 89 |
| EU887279.1 | Swine vesicular disease virus SVDV02, complete genome | 246 | .........g.....t... | 264 | 89 |
| EU887280.1 | Swine vesicular disease virus SVDV03, complete genome | 246 | .........g.....t... | 264 | 89 |
| EU887281.1 | Swine vesicular disease virus SVDV04, complete genome | 246 | .........g.....t... | 264 | 89 |
| EU887282.1 | Swine vesicular disease virus SVDV, complete genome | 246 | .........g.....t... | 264 | 89 |
| FJ172447.1 | Human echovirus 4 strain AUS250G, complete genome | 251 | .........g..g...... | 269 | 89 |
| HM775882.1 | Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome | 245 | ........gg......... | 263 | 89 |
| U22522.1 | ETU22522 Human enterovirus 71 polyprotein gene, complete cds | 248 | .........g..g...... | 266 | 89 |
| AF177911.1 | Coxsackievirus A16 polyprotein gene, complete cds | 250 | .........g.....t... | 268 | 89 |
| AF316321.2 | Enterovirus 5865/sin/000009, complete genome | 248 | .........g.....t... | 266 | 89 |
| AF352027.1 | Enterovirus 5666/sin/002209, complete genome | 248 | .........g.....t... | 266 | 89 |
| AY421763.1 | Human coxsackievirus A5 strain Swartz, complete genome | 245 | .........g.....t... | 263 | 89 |
| AY421764.1 | Human coxsackievirus A6 strain Gdula, complete genome | 249 | .........g.....t... | 267 | 89 |
| AY421769.1 | Human coxsackievirus A14 strain G-14, complete genome | 253 | .........g.....t... | 271 | 89 |
| AJ586873.1 | Human enterovirus 71 gene for polyprotein, isolate EV71/9/97/SHA89 | 248 | .........g.....t... | 266 | 89 |
| AY790926.1 | Human coxsackievirus A16 strain shzh00-1, complete genome | 250 | .........g.....t... | 268 | 89 |
| AY697459.1 | Human enterovirus 89 polyprotein gene, complete cds | 246 | ........gg......... | 264 | 89 |
| AB204852.1 | Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-TR | 247 | .........g.....t... | 265 | 89 |
| AB204853.1 | Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-ts | 247 | .........g.....t... | 265 | 89 |
| DQ341354.1 | Human enterovirus 71 isolate 3799-SIN-98, complete genome | 249 | .........g.....t... | 267 | 89 |
| DQ341365.1 | Human enterovirus 71 isolate PP37-MAL-01, complete genome | 248 | .........g.....t... | 266 | 89 |
| DQ341366.1 | Human enterovirus 71 isolate SB2864-SAR-00, complete genome | 248 | .........g.....t... | 266 | 89 |
| DQ341367.1 | Human enterovirus 71 isolate MY821-3-SAR-97, complete genome | 248 | .........g.....t... | 266 | 89 |
| DQ341368.1 | Human enterovirus 71 isolate MY104-9-SAR-97, complete genome | 248 | .........g.....t... | 266 | 89 |
| AM396586.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate EV71/ | 248 | .........g.....t... | 266 | 89 |
| AM396587.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate UH1/P | 248 | .........g.....t... | 266 | 89 |
| EF667343.1 | Simian enterovirus 46 strain RNM5, complete genome | 244 | ............g..t... | 262 | 89 |
| EU262658.1 | Human coxsackievirus A16 strain shzh05-1, complete genome | 250 | .........g.....t... | 268 | 89 |
| EU364841.1 | Human enterovirus 71 strain 26M/AUS/4/99, complete genome | 249 | .........g.....t... | 267 | 89 |
| EU376004.1 | Human enterovirus 71 26M/AUS/4/99 CHO cell-adapted, complete genome | 249 | .........g.....t... | 267 | 89 |
| EU376005.1 | Human enterovirus 71 26M/AUS/4/99 mouse-adapted, complete genome | 249 | .........g.....t... | 267 | 89 |
| FJ198212.1 | Human coxsackievirus A16 strain GZ08, complete genome | 250 | .........g.....t... | 268 | 89 |
| AB469182.1 | Human enterovirus 71 gene for polyprotein, complete cds, strain: SK-E | 247 | .........g.....t... | 265 | 89 |
| AB469183.1 | Human enterovirus 71 gene for polyprotein, complete cds, strain: EV71 | 247 | .........g.....t... | 265 | 89 |
| AB482183.1 | Human enterovirus 71 genomic RNA, complete genome, strain: Nagoya | 249 | .........g..g...... | 267 | 89 |
| GQ994992.1 | Human enterovirus 71 strain Henan2-09-China, complete genome | 236 | ........gg......... | 254 | 89 |
| GU434678.1 | Human enterovirus 71 strain EV71-Hubei-09-China, complete genome | 247 | .........g.....t... | 265 | 89 |
| GQ279368.1 | Human coxsackievirus A16 strain SZ/HK08-3, complete genome | 250 | .........g.....t... | 268 | 89 |
| GQ279371.1 | Human coxsackievirus A16 strain SZ/HK08-7, complete genome | 250 | .........g.....t... | 268 | 89 |
| HQ189392.1 | Human enterovirus 71 isolate HUN/1978, complete genome | 249 | .........g..g...... | 267 | 89 |
| AB550334.1 | Human enterovirus 71 genomic RNA, complete genome, strain: SK-EV006-o | 247 | .........g.....t... | 265 | 89 |
| AB550335.1 | Human enterovirus 71 genomic RNA, complete genome, strain: SK-EV006-L | 247 | .........g.....t... | 265 | 89 |
| AB550336.1 | Human enterovirus 71 genomic RNA, complete genome, strain: C7/Osaka-o | 249 | .........g.....t... | 267 | 89 |
| AB550337.1 | Human enterovirus 71 genomic RNA, complete genome, strain: C7/Osaka-L | 249 | .........g.....t... | 267 | 89 |
| AB575913.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 119 | 174 | .........g..g...... | 192 | 89 |
| AB575914.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 170 | 183 | .........g..g...... | 201 | 89 |
| AB575915.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 944 | 194 | .........g..g...... | 212 | 89 |
| AB575916.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 161 | 185 | .........g..g...... | 203 | 89 |
| AB575917.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101 | 200 | .........g..g...... | 218 | 89 |
| AB575918.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 205 | 185 | .........g..g...... | 203 | 89 |
| AB575923.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 202 | 191 | .........g..g...... | 209 | 89 |
| AB575927.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 113 | 184 | .........g.....t... | 202 | 89 |
| AB575927.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 113 | 3493 | ___....tc........._ | 3507 | 68 |
| AB575928.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 115 | 185 | .........g.....t... | 203 | 89 |
| AB575928.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 115 | 3494 | ___....tc........._ | 3508 | 68 |
| HQ269389.1 | Human coxsackievirus A16 isolate XM-CA16-3560, complete genome | 250 | .........g.....t... | 268 | 89 |
| X00595.1 | Poliovirus type 2 genome (strain Sabin 2 (P712, Ch, 2ab)) | 240 | _...........g..t... | 257 | 84 |
| AY184220.1 | Human poliovirus 2 strain Sabin 2, complete genome | 240 | _...........g..t... | 257 | 84 |
| AY177685.1 | Human poliovirus 2, complete genome | 240 | _...........g..t... | 257 | 84 |
| AY278549.1 | Human poliovirus 2 isolate P2S/Mog65-3 (20120), complete genome | 240 | _...........g..t... | 257 | 84 |
| AY278550.1 | Human poliovirus 2 isolate P2S/Mog65-1 (20003), complete genome | 240 | _...........g..t... | 257 | 84 |
| AY278551.1 | Human poliovirus 2 isolate P2S/Mog66-4 (21043), complete genome | 240 | _...........g..t... | 257 | 84 |
| AY278552.1 | Human poliovirus 2 isolate P2S/Mog65-2 (20077), complete genome | 240 | _...........g..t... | 257 | 84 |
| AY876912.1 | Human enterovirus Ningbo3-02, complete genome | 242 | _...........g..t... | 259 | 84 |
| AY876913.1 | Human enterovirus Hangzhou13-02, complete genome | 242 | _...........g..t... | 259 | 84 |
| AY948201.1 | Human poliovirus 2 isolate CHN1025 polyprotein gene, complete cds | 241 | _...........g..t... | 258 | 84 |
| AM040035.1 | Human poliovirus 2 complete virion genome, isolate PV2/4568-1/ISR98 | 144 | _...........g..t... | 161 | 84 |
| DQ205099.1 | Human poliovirus 2 clone S2R9, complete genome | 240 | _...........g..t... | 257 | 84 |
| AM084223.1 | Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA, | 240 | _...........g..t... | 257 | 84 |
| AM084224.1 | Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA, | 240 | _...........g..t... | 257 | 84 |
| AM084225.1 | Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA, | 240 | _...........g..t... | 257 | 84 |
| DQ890385.1 | Human poliovirus 2 strain NIE0210766, complete genome | 240 | _...........g..t... | 257 | 84 |
| EF555645.1 | Human enterovirus 102, complete genome | 243 | _...........g..t... | 260 | 84 |
| AM884184.1 | Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD005 | 240 | _...........g..t... | 257 | 84 |
| AM884185.1 | Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD006 | 240 | _...........g..t... | 257 | 84 |
| FJ898290.1 | Human poliovirus 2 strain Sabine 2 isolate CHN3024/HN/CHN/1999, compl | 240 | _...........g..t... | 257 | 84 |
| HM107832.1 | Human poliovirus 2 isolate CHN1054, complete genome | 240 | _...........g..t... | 257 | 84 |
| HM107833.1 | Human poliovirus 2 isolate CHN1078, complete genome | 240 | _...........g..t... | 257 | 84 |
| HM107834.1 | Human poliovirus 2 isolate CHN3219, complete genome | 240 | _...........g..t... | 257 | 84 |
| HM107835.1 | Human poliovirus 2 isolate CHN8316, complete genome | 240 | _...........g..t... | 257 | 84 |
| X05690.1 | Coxsackievirus B4 complete genome | 247 | .........g..g..t... | 265 | 84 |
| D00627.1 | CXA9CG Human coxsackievirus A9 genomic RNA, complete genome, strain: G | 247 | .........g..g..t... | 265 | 84 |
| AF241359.1 | Enterovirus CA55-1988, complete genome | 248 | .........g..g..t... | 266 | 84 |
| AY843308.1 | Human enterovirus 101 strain CIV03-10361, complete genome | 246 | .........g....tt... | 264 | 84 |
| DQ480420.1 | Human coxsackievirus B4 strain Tuscany, complete genome | 247 | .........g..g..t... | 265 | 84 |
| U22521.1 | ETU22521 Human enterovirus 71 polyprotein gene, complete cds | 247 | .........g..g..t... | 265 | 84 |
| AY421767.1 | Human coxsackievirus A10 strain Kowalik, complete genome | 246 | .........g....tt... | 264 | 84 |
| AM396588.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate EV71/ | 239 | .........g.g...t... | 257 | 84 |
| EF373575.1 | Human enterovirus 71 strain E2002042-TW-CDC polyprotein gene, complet | 250 | .........g..g..t... | 268 | 84 |
| EF667344.1 | Human enterovirus 92 strain RJG7, complete genome | 244 | .........g..g..t... | 262 | 84 |
| AF326764.2 | Simian enterovirus 46 strain OM22 (P15), complete genome | 244 | .........g..g..t... | 262 | 84 |
| EU812514.1 | Human coxsackievirus A16 strain FY18 from China, complete genome | 252 | .........g..g..t... | 270 | 84 |
| HQ423141.1 | Human coxsackievirus A16 strain KMM/08, complete genome | 250 | .........g.....t.t. | 268 | 84 |
| DQ890388.1 | Human poliovirus 2 strain PER8310769, complete genome | 240 | _...........g.tt... | 257 | 78 |
| AF230973.1 | AF230973 Enterovirus Yanbian 96-83csf, complete genome | 251 | .........g..g.tt... | 269 | 78 |
| AY302551.1 | Human echovirus 27 strain Bacon complete genome | 248 | .........g..g..t.c. | 266 | 78 |
| AJ849942.1 | Human echovirus 3 gene for polyprotein, genomic RNA, strain PicoBank/ | 246 | .........g..g.tt... | 264 | 78 |
| AF119795.2 | Enterovirus 71 strain TW/2272/98 polyprotein gene, complete cds | 245 | .........g..g.tt... | 263 | 78 |
| AF136379.1 | Enterovirus 71 isolate NCKU9822 polyprotein mRNA, complete cds | 247 | .........g..g.tt... | 265 | 78 |
| AF119796.3 | Enterovirus 71 strain TW/2086/98 polyprotein gene, complete cds | 245 | .........g..g.tt... | 263 | 78 |
| AF176044.1 | Enterovirus 71 polyprotein gene, complete cds | 248 | .........g..g.tt... | 266 | 78 |
| AF304457.1 | Enterovirus 71 strain Tainan/5746/98 polyprotein mRNA, complete cds | 247 | .........g..g.tt... | 265 | 78 |
| AF304458.1 | Enterovirus 71 strain Tainan/4643/98 polyprotein mRNA, complete cds | 247 | .........g..g.tt... | 265 | 78 |
| AF304459.1 | Enterovirus 71 strain Tainan/6092/98 polyprotein mRNA, complete cds | 247 | .........g..g.tt... | 265 | 78 |
| AY421766.1 | Human coxsackievirus A8 strain Donovan, complete genome | 247 | .........g..g.tt... | 265 | 78 |
| DQ060149.1 | Human enterovirus 71 strain pinf7-54A from Taiwan, complete genome | 247 | .........g..g.tt... | 265 | 78 |
| DQ341355.1 | Human enterovirus 71 isolate 06-KOR-00, complete genome | 246 | .........g..g.tt... | 264 | 78 |
| DQ341355.1 | Human enterovirus 71 isolate 06-KOR-00, complete genome | 3556 | ____...tc.......... | 3570 | 68 |
| DQ341356.1 | Human enterovirus 71 isolate 03-KOR-00, complete genome | 246 | .........g..g.tt... | 264 | 78 |
| DQ341356.1 | Human enterovirus 71 isolate 03-KOR-00, complete genome | 3556 | ____...tc.......... | 3570 | 68 |
| DQ341357.1 | Human enterovirus 71 isolate 7F-AUS-6-99, complete genome | 246 | .........g..g.tt... | 264 | 78 |
| DQ341358.1 | Human enterovirus 71 isolate S40221-SAR-00, complete genome | 246 | .........g..g.tt... | 264 | 78 |
| DQ341359.1 | Human enterovirus 71 isolate S10862-SAR-98, complete genome | 246 | .........g..g.tt... | 264 | 78 |
| DQ341359.1 | Human enterovirus 71 isolate S10862-SAR-98, complete genome | 3555 | ___....tc........._ | 3569 | 68 |
| DQ341360.1 | Human enterovirus 71 isolate J115-MAL-01, complete genome | 245 | .........g..g.tt... | 263 | 78 |
| DQ341361.1 | Human enterovirus 71 isolate 1M-AUS-12-00, complete genome | 246 | .........g..g.tt... | 264 | 78 |
| DQ381846.1 | Human enterovirus 71 strain 6F/AUS/6/99, complete genome | 246 | .........g..g.tt... | 264 | 78 |
| DQ452074.1 | Human enterovirus 71 strain 804/NO/03, complete genome | 247 | .........g..g.tt... | 265 | 78 |
| AM396584.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P | 245 | .........g..g.tt... | 263 | 78 |
| AM396585.1 | Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P | 245 | .........g..g.tt... | 263 | 78 |
| EF063152.1 | Human enterovirus 71 strain E2005125-TW polyprotein gene, complete cd | 246 | .........g..g.tt... | 264 | 78 |
| EF063152.1 | Human enterovirus 71 strain E2005125-TW polyprotein gene, complete cd | 3556 | ____...tc.......... | 3570 | 68 |
| EU414334.1 | Human enterovirus 71 strain PLday4-CH-06, complete genome | 245 | .........g..g.tt... | 263 | 78 |
| EU414335.1 | Human enterovirus 71 strain PLday1-CH-06, complete genome | 245 | .........g..g.tt... | 263 | 78 |
| FJ172159.1 | Human enterovirus 71 isolate NUH0075/SIN/08, complete genome | 207 | .........g..g.tt... | 225 | 78 |
| AB550332.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 1095-org | 246 | .........g..g.tt... | 264 | 78 |
| AB550333.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 1095-LPS1 | 246 | .........g..g.tt... | 264 | 78 |
| AB550340.1 | Human enterovirus 71 genomic RNA, complete genome, strain: KED005-org | 246 | .........g..g.tt... | 264 | 78 |
| AB550341.1 | Human enterovirus 71 genomic RNA, complete genome, strain: KED005-LPS | 246 | .........g..g.tt... | 264 | 78 |
| AB575935.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 480 | 190 | .........g..g.tt... | 208 | 78 |
| AB575936.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 961 | 185 | .........g..g.tt... | 203 | 78 |
| AB575937.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 141 | 158 | .........g..g.tt... | 176 | 78 |
| AB575938.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100 | 219 | .........g..g.tt... | 237 | 78 |
| AB575939.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 365 | 177 | .........g..g.tt... | 195 | 78 |
| AB575941.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 248 | 185 | .........g..g.tt... | 203 | 78 |
| AB575942.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 369 | 180 | .........g..g.tt... | 198 | 78 |
| AB575948.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101 | 203 | .........g..g.tt... | 221 | 78 |
| AB180070.1 | Human poliovirus 1 gene for polyprotein, complete cds, isolate:Mindan | 6171 | _..........._______ | 6161 | 57 |
| AB180071.1 | Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon- | 6171 | _..........._______ | 6161 | 57 |
| AB180072.1 | Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon- | 6171 | _..........._______ | 6161 | 57 |
| AB180073.1 | Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon- | 6171 | _..........._______ | 6161 | 57 |
| AF328683.1 | Human coxsackievirus B4 polyprotein-like gene, complete sequence | 249 | ...........________ | 259 | 57 |
| AB550338.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat | 3561 | ___..........._____ | 3551 | 57 |
| AB550339.1 | Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat | 3561 | ___..........._____ | 3551 | 57 |