../../tmp/servers/virsirnadb/401904305
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2063 | 1 | ctatgcataccgttcctgt | 19 | |
| NC_004280.1 | Mammalian orthoreovirus 3 segment M1, complete sequence | 969 | ................... | 987 | 100 |
| AF461684.1 | Mammalian orthoreovirus 3 strain Dearing minor core protein mu-2 (M1) | 969 | ................... | 987 | 100 |
| NC_004280.1 | Mammalian orthoreovirus 3 segment M1, complete sequence | 969 | ................... | 987 | 100 |
| X59945.1 | Reovirus type 1 Lang gene for mu2 protein, genomic RNA | 969 | ................g.. | 987 | 94 |
| AF461683.1 | Mammalian orthoreovirus 3 strain Dearing minor core protein mu-2 (M1) | 969 | ................g.. | 987 | 94 |
| AY428870.1 | Mammalian orthoreovirus 1 clone 11 minor core protein mu2 gene, compl | 969 | ................g.. | 987 | 94 |
| AY428872.1 | Mammalian orthoreovirus 1 strain Netherlands 84 minor core protein mu | 969 | ................g.. | 987 | 94 |
| AY428875.1 | Mammalian orthoreovirus 3 clone 18 minor core protein mu2 gene, compl | 969 | ................g.. | 987 | 94 |
| AY428877.1 | Mammalian orthoreovirus 3 strain Netherlands 83 minor core protein mu | 969 | ................g.. | 987 | 94 |
| AY428878.1 | Mammalian orthoreovirus 3 strain tsC447 minor core protein mu2 gene, | 969 | ................g.. | 987 | 94 |
| AY551083.1 | Mammalian orthoreovirus 3 minor core protein mu2 (M1) mRNA, complete | 969 | ................g.. | 987 | 94 |
| DQ396804.2 | Mammalian orthoreovirus strain SC-A segment M1 mu-2 protein gene, com | 969 | ................g.. | 987 | 94 |
| EF494438.1 | Mammalian orthoreovirus 3 strain T3D segment M1, complete sequence | 969 | ................g.. | 987 | 94 |
| HM159616.1 | Mammalian orthoreovirus 3 Dearing strain T3D segment M1, complete seq | 969 | ................g.. | 987 | 94 |
| GU991662.1 | Mammalian orthoreovirus 3 isolate R124 segment M1, complete sequence | 969 | ................g.. | 987 | 94 |
| GU991672.1 | Mammalian orthoreovirus 3 isolate Q2R segment M1, complete sequence | 969 | ................g.. | 987 | 94 |
| HQ642772.1 | Mammalian orthoreovirus strain MRV-HLJ/2007 mu-2 protein gene, comple | 970 | _...............g.. | 987 | 89 |
| AY428871.1 | Mammalian orthoreovirus 1 clone 29 minor core protein mu2 gene, compl | 969 | .............c..g.. | 987 | 89 |
| AY428876.1 | Mammalian orthoreovirus 3 clone 44 minor core protein mu2 gene, compl | 969 | .............c..g.. | 987 | 89 |
| DQ664187.1 | Mammalian orthoreovirus 2 isolate BYD1 segment M1, complete sequence | 969 | .............c..a.. | 987 | 89 |
| GU589580.1 | Mammalian orthoreovirus 3 strain Abney segment M1, complete sequence | 969 | .............c..g.. | 987 | 89 |
| NC_013227.1 | Mammalian orthoreovirus 3 segment M1, complete genome | 970 | _............c..a.. | 987 | 84 |
| GU196309.1 | Mammalian orthoreovirus 2 segment M1 u2 protein gene, complete cds | 956 | .c...........c..a.. | 974 | 84 |
| HQ642773.1 | Mammalian orthoreovirus strain MRV-HLJ/2007 mu-1 protein gene, comple | 5 | ________.........c. | 15 | 52 |
| GU196313.1 | Mammalian orthoreovirus 2 segment S4 sigma 3 protein gene, complete c | 951 | ___........._______ | 943 | 47 |
| DQ220018.1 | Reovirus sp. T2W segment S3 sigma NS gene, complete cds | 770 | _........._________ | 778 | 47 |
| GU196308.1 | Mammalian orthoreovirus 2 segment L3 lambda-1 protein gene, complete | 3532 | ____.........______ | 3540 | 47 |