../../tmp/servers/virsirnadb/58392917
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1739 | 1 | ctctactgttatgagc | 16 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 625 | ................ | 640 | 100 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 4522 | _.........._____ | 4513 | 62 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 7544 | __............a. | 7531 | 81 |
| NC_014326.1 | Mus musculus papillomavirus type 1, complete genome | 5272 | _...........a.._ | 5285 | 81 |
| NC_004500.1 | Human papillomavirus type 92, complete genome | 1863 | ____............ | 1852 | 75 |
| NC_004500.1 | Human papillomavirus type 92, complete genome | 7216 | ...atg........._ | 7230 | 75 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 2915 | ..........g..t._ | 2929 | 81 |
| NC_008297.1 | Canine papillomavirus 3, complete genome | 5328 | .a...........___ | 5340 | 75 |
| NC_008519.1 | Mastomys coucha papillomavirus 2, complete genome | 5412 | .........c...___ | 5424 | 75 |
| NC_001596.1 | Human papillomavirus type 9, complete genome | 3053 | ___..a.......... | 3065 | 75 |
| NC_008184.1 | Tursiops truncatus papillomavirus 2, complete genome | 1488 | ..........._____ | 1478 | 68 |
| NC_012486.1 | Human papillomavirus type 112, complete genome | 6494 | .a.........a..a. | 6479 | 81 |
| NC_012486.1 | Human papillomavirus type 112, complete genome | 1368 | ___.........t.._ | 1357 | 68 |
| NC_010107.1 | Bandicoot papillomatosis carcinomatosis virus type 1, complete genome | 2375 | __.........gt... | 2362 | 75 |
| NC_010107.1 | Bandicoot papillomatosis carcinomatosis virus type 1, complete genome | 5224 | ..........______ | 5215 | 62 |
| NC_010329.1 | Human papillomavirus type 88, complete genome | 5449 | _..........ac.._ | 5436 | 75 |
| NC_006951.1 | Erethizon dorsatum papillomavirus type 1, complete genome | 390 | ..........g.c.__ | 377 | 75 |
| NC_007612.1 | Bovine papillomavirus 7, complete genome | 5673 | __.a..a......... | 5660 | 75 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 7328 | _.g..........___ | 7339 | 68 |
| NC_014956.1 | Human papillomavirus type 134, complete genome | 3936 | ___.........a.._ | 3947 | 68 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 3545 | __..........a.__ | 3534 | 68 |
| NC_001789.1 | Ovine papillomavirus - 1, complete genome | 308 | ..........______ | 299 | 62 |
| NC_006564.1 | Canine papillomavirus 2, complete genome | 1567 | ____..........__ | 1576 | 62 |
| NC_014469.1 | Gammapapillomavirus HPV127, complete genome | 4847 | ..........______ | 4838 | 62 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 675 | ______.......... | 684 | 62 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 7439 | ______.......... | 7448 | 62 |
| NC_006563.1 | Trichechus manatus latirostris papillomavirus 1, complete genome | 2379 | _.........._____ | 2370 | 62 |
| NC_001458.1 | Human papillomavirus type 63, complete genome | 617 | ..aa.t........._ | 631 | 75 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 7417 | _.g.........c.__ | 7429 | 68 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 5997 | __.........ac.._ | 5985 | 68 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 5144 | ___.........ag.. | 5156 | 68 |
| NC_001595.1 | Human papillomavirus type 7, complete genome | 4324 | ___.........tg.. | 4336 | 68 |