VIRsiRNAdb

../../tmp/servers/virsirnadb/1515100278
Result for your query siRNA sequence

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Strain name	Start	Alignment	End	% Identity
Query	virsi2007	1	`gacccccggcgtaggtcgcg`	20
X61596.1	Hepatitis C virus core, E1, NS1/E2, NS2, NS3, NS4a, NS4b and NS5 gene	655	`....................`	674	100
D10749.1	HPCHCJ1 Hepatitis C virus genomic RNA, complete genome, isolate: HC-J1	672	`....................`	691	100
D13558.1	HPCJ483 Hepatitis C virus genome, complete sequence	672	`....................`	691	100
D10750.1	HPCJ491 Hepatitis C virus genome, complete sequence	672	`....................`	691	100
D90208.1	HPCJCG Hepatitis C virus ORF gene, complete cds	660	`....................`	679	100
M67463.1	HPCCGAA Hepatitis C virus subtype 1a, complete genome	672	`....................`	691	100
L02836.1	HPCCGENOM Hepatitis C virus subtype 1b strain HeBei, complete genome	661	`....................`	680	100
M84754.1	HPCGENANTI Hepatitis C virus subtype 1b strain Taiwan, complete genome	672	`....................`	691	100
M58335.1	HPCHUMR Hepatitis C virus subtype 1b, complete genome	663	`....................`	682	100
M62321.1	HPCPLYPRE Hepatitis C virus subtype 1a, complete genome	672	`....................`	691	100
S62220.1	Hepatitis C virus subtype 1b, complete genome	671	`....................`	690	100
U01214.1	HCU01214 Hepatitis C virus subtype 1b strain HCV-L2, complete genome	673	`....................`	692	100
D10934.1	HPCRNA Hepatitis C virus RNA, complete genome sequence	672	`....................`	691	100
D30613.1	HPCPP Hepatitis C virus complete genome sequence	672	`....................`	691	100
D63857.1	HPVHCVN Hepatitis C virus gene for E1 and E2/NS1 envelope glycoprotein	579	`....................`	598	100
D50482.1	HPCK1R3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R3), complete g	660	`....................`	679	100
D50483.1	HPCK1S1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S1), complete g	660	`....................`	679	100
D50484.1	HPCK1S3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S3), complete g	660	`....................`	679	100
D50485.1	HPCK1S2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S2), complete g	660	`....................`	679	100
D50481.1	HPCK1R2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R2), complete g	660	`....................`	679	100
D50480.1	HPCK1R1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R1), complete g	660	`....................`	679	100
D14484.1	HPCJRNA Hepatitis C virus strain J33 genomic RNA, complete genome	672	`....................`	691	100
U45476.1	HCU45476 Hepatitis C virus isolate HD-1, complete genome	672	`....................`	691	100
D45172.1	HPCHCPO Hepatitis C virus genomic RNA for HCV polyprotein, complete cd	672	`....................`	691	100
D89872.1	Hepatitis C virus RNA for polyprotein, complete cds	331	`....................`	350	100
D85516.1	Hepatitis C virus genomic RNA, complete cds	672	`....................`	691	100
AF011751.1	Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds	672	`....................`	691	100
AF011752.1	Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds	672	`....................`	691	100
AF011753.1	Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds	672	`....................`	691	100
U89019.1	HCU89019 Hepatitis C virus subtype 1b, complete genome	670	`....................`	689	100
AJ000009.1	Hepatitis C virus complete genome sequence	655	`....................`	674	100
D89815.1	Hepatitis C virus genomic RNA, complete sequence	672	`....................`	691	100
AF054247.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L6S, complete	672	`....................`	691	100
AF054248.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L2S, complete	672	`....................`	691	100
AF054249.1	Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L4S, complete	673	`....................`	692	100
AF054250.1	Hepatitis C virus subtype 1b strain HC-J4, complete genome	662	`....................`	681	100
AJ132996.1	Hepatitis C virus, complete genome, isolate HCV-AD78	671	`....................`	690	100
AJ132997.1	Hepatitis C virus, complete genome, isolate HCV-AD78P1	671	`....................`	690	100
AJ238799.1	Hepatitis C virus type 1b complete genome, isolate Con1	672	`....................`	691	100
AF176573.1	Hepatitis C virus subtype 1b strain 274933RU, complete genome	672	`....................`	691	100
AJ238800.1	Hepatitis C virus type 1b complete genome, isolate NC1	331	`....................`	350	100
AB016785.1	Hepatitis C virus genomic RNA, complete sequence	673	`....................`	692	100
AF165045.1	Hepatitis C virus subtype 1b strain MD1-1, complete genome	660	`....................`	679	100
AF165046.1	Hepatitis C virus subtype 1b strain MD1-2, complete genome	660	`....................`	679	100
AF165047.1	Hepatitis C virus subtype 1b strain MD2-1, complete genome	660	`....................`	679	100
AF165048.1	Hepatitis C virus subtype 1b strain MD2-2, complete genome	660	`....................`	679	100
AF165049.1	Hepatitis C virus subtype 1b strain MD3-1, complete genome	660	`....................`	679	100
AF165050.1	Hepatitis C virus subtype 1b strain MD3-2, complete genome	660	`....................`	679	100
AF165051.1	Hepatitis C virus subtype 1b strain MD4-1, complete genome	660	`....................`	679	100
AF165052.1	Hepatitis C virus subtype 1b strain MD4-2, complete genome	660	`....................`	679	100
AF165053.1	Hepatitis C virus subtype 1b strain MD5-1, complete genome	660	`....................`	679	100
AF165054.1	Hepatitis C virus subtype 1b strain MD5-2, complete genome	660	`....................`	679	100
AF165055.1	Hepatitis C virus subtype 1b strain MD6-1, complete genome	660	`....................`	679	100
AF165056.1	Hepatitis C virus subtype 1b strain MD6-2, complete genome	660	`....................`	679	100
AF165057.1	Hepatitis C virus subtype 1b strain MD7-1, complete genome	660	`....................`	679	100
AF165058.1	Hepatitis C virus subtype 1b strain MD7-2, complete genome	660	`....................`	679	100
AF165059.1	Hepatitis C virus subtype 1b strain MD8-1, complete genome	660	`....................`	679	100
AF165060.1	Hepatitis C virus subtype 1b strain MD8-2, complete genome	660	`....................`	679	100
AF165061.1	Hepatitis C virus subtype 1b strain MD9-1, complete genome	660	`....................`	679	100
AF165062.1	Hepatitis C virus subtype 1b strain MD9-2, complete genome	660	`....................`	679	100
AF208024.1	Hepatitis C virus subtype 1b strain MD34, complete genome	660	`....................`	679	100
AF207752.1	Hepatitis C virus subtype 1b strain MD11, complete genome	660	`....................`	679	100
AF207753.1	Hepatitis C virus subtype 1b strain MD12, complete genome	660	`....................`	679	100
AF207754.1	Hepatitis C virus subtype 1b strain MD13, complete genome	660	`....................`	679	100
AF207755.1	Hepatitis C virus subtype 1b strain MD14, complete genome	660	`....................`	679	100
AF207756.1	Hepatitis C virus subtype 1b strain MD15, complete genome	660	`....................`	679	100
AF207757.1	Hepatitis C virus subtype 1b strain MD16, complete genome	660	`....................`	679	100
AF207758.1	Hepatitis C virus subtype 1b strain MD17, complete genome	660	`....................`	679	100
AF207759.1	Hepatitis C virus subtype 1b strain MD18, complete genome	660	`....................`	679	100
AF207760.1	Hepatitis C virus subtype 1b strain MD19, complete genome	660	`....................`	679	100
AF207761.1	Hepatitis C virus subtype 1b strain MD20, complete genome	660	`....................`	679	100
AF207762.1	Hepatitis C virus subtype 1b strain MD21, complete genome	660	`....................`	679	100
AF207763.1	Hepatitis C virus subtype 1b strain MD22, complete genome	660	`....................`	679	100
AF207764.1	Hepatitis C virus subtype 1b strain MD23, complete genome	660	`....................`	679	100
AF207765.1	Hepatitis C virus subtype 1b strain MD24, complete genome	660	`....................`	679	100
AF207766.1	Hepatitis C virus subtype 1b strain MD25, complete genome	660	`....................`	679	100
AF207766.1	Hepatitis C virus subtype 1b strain MD25, complete genome	1758	`___.............____`	1746	65
AF207767.1	Hepatitis C virus subtype 1b strain MD26, complete genome	660	`....................`	679	100
AF207768.1	Hepatitis C virus subtype 1b strain MD27, complete genome	660	`....................`	679	100
AF207770.1	Hepatitis C virus subtype 1b strain MD29, complete genome	660	`....................`	679	100
AF207771.1	Hepatitis C virus subtype 1b strain MD30, complete genome	660	`....................`	679	100
AF207772.1	Hepatitis C virus subtype 1b strain MD31, complete genome	660	`....................`	679	100
AF207773.1	Hepatitis C virus subtype 1b strain MD32, complete genome	660	`....................`	679	100
AF207774.1	Hepatitis C virus subtype 1b strain MD33, complete genome	660	`....................`	679	100
AF271632.1	Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome	672	`....................`	691	100
AF290978.1	Hepatitis C virus subtype 1a isolate colonel, complete genome	660	`....................`	679	100
AB049087.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT05	641	`....................`	660	100
AB049088.1	Hepatitis C virus genomic RNA, complete genome, isolate: HCVT094	672	`....................`	691	100
AB049089.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT10	641	`....................`	660	100
AB049090.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	641	`....................`	660	100
AB049091.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	590	`....................`	609	100
AB049092.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14	641	`....................`	660	100
AB049093.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT15	641	`....................`	660	100
AB049094.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT16	673	`....................`	692	100
AB049095.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT16	641	`....................`	660	100
AB049096.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19	641	`....................`	660	100
AB049097.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19	641	`....................`	660	100
AB049098.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT20	641	`....................`	660	100
AB049099.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21	672	`....................`	691	100
AB049100.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21	641	`....................`	660	100
AB049101.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT22	641	`....................`	660	100
AF333324.1	Hepatitis C virus type 1b polyprotein mRNA, complete cds	672	`....................`	691	100
AF356827.1	Hepatitis C virus subtype 1b isolate HCV-S1, complete genome	672	`....................`	691	100
AY045702.1	Hepatitis C virus isolate HCR6, complete genome	674	`....................`	693	100
AF483269.1	Hepatitis C virus type 1b isolate HCV-TR1 from Turkey, complete genom	637	`....................`	656	100
AF511948.1	Hepatitis C virus isolate XF222 polyprotein-like gene, complete seque	672	`....................`	691	100
AF511949.1	Hepatitis C virus isolate XF223 polyprotein-like gene, complete seque	672	`....................`	691	100
AF511950.1	Hepatitis C virus isolate XF224 polyprotein-like gene, complete seque	644	`....................`	663	100
AF139594.2	Hepatitis C virus subtype 1b strain HCV-N, complete genome	672	`....................`	691	100
AB080299.1	Hepatitis C virus genomic RNA, complete genome, isolate:M1LE	672	`....................`	691	100
AY460204.1	Hepatitis C virus from Shanghai, complete genome	672	`....................`	691	100
AY587844.1	Hepatitis C virus strain N589 polyprotein gene, complete cds	620	`....................`	639	100
AB154177.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154178.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154179.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154180.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154181.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154182.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154183.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154185.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154186.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154187.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154189.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154190.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154191.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154192.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154198.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154199.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154201.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154202.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154203.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154204.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154205.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB154206.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`....................`	679	100
AB191333.1	Hepatitis C virus genomic RNA, complete genome, strain:0	672	`....................`	691	100
DQ071885.1	Hepatitis C virus subtype 1b polyprotein mRNA, complete cds	672	`....................`	691	100
AJ851228.1	Hepatitis C virus gene for polyprotein, genomic RNA, isolate Equatori	645	`....................`	664	100
EF032883.1	Hepatitis C virus subtype 1a isolate 03-32_P1_10.16.03 polyprotein ge	594	`....................`	613	100
EF032884.1	Hepatitis C virus subtype 1a isolate 03-32_P2_5.14.04 polyprotein gen	573	`....................`	592	100
EF032885.1	Hepatitis C virus subtype 1a isolate 03-32_P4_11.5.05 polyprotein gen	593	`....................`	612	100
EF032886.1	Hepatitis C virus subtype 1a isolate BR601 polyprotein gene, complete	599	`....................`	618	100
EF032887.1	Hepatitis C virus subtype 1a isolate BR554_P1_5.23.03 polyprotein gen	606	`....................`	625	100
EF032888.1	Hepatitis C virus subtype 1a isolate BR554_P10_10.21.03 polyprotein g	594	`....................`	613	100
EF032889.1	Hepatitis C virus subtype 1a isolate BR554_P16_6.24.04 polyprotein ge	578	`....................`	597	100
EF032890.1	Hepatitis C virus subtype 1a isolate BR554_P17_10.21.04 polyprotein g	592	`....................`	611	100
EF032892.1	Hepatitis C virus subtype 1b isolate BR1427_P1_10.7.03 polyprotein ge	648	`....................`	667	100
EF032893.1	Hepatitis C virus subtype 1b isolate BR1427_P3_11.10.03 polyprotein g	646	`....................`	665	100
EF032900.1	Hepatitis C virus subtype 1a isolate BR111_P5_4.30.03 polyprotein gen	592	`....................`	611	100
AB249644.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima	672	`....................`	691	100
EF621489.1	Hepatitis C virus subtype 1a strain HC-TN, complete genome	672	`....................`	691	100
EF638081.1	Hepatitis C virus subtype 1b from Hubei, complete genome	628	`....................`	647	100
EF407411.1	Hepatitis C virus isolate 5043 polyprotein gene, complete cds	578	`....................`	597	100
EF407413.1	Hepatitis C virus isolate 5012 polyprotein gene, complete cds	619	`....................`	638	100
EF407414.1	Hepatitis C virus isolate 7018 polyprotein gene, complete cds	575	`....................`	594	100
EF407415.1	Hepatitis C virus isolate 3018 polyprotein gene, complete cds	622	`....................`	641	100
EF407418.1	Hepatitis C virus isolate 7020 polyprotein gene, complete cds	616	`....................`	635	100
EF407419.1	Hepatitis C virus isolate 5003 polyprotein gene, complete cds	623	`....................`	642	100
EF407421.1	Hepatitis C virus isolate 8030 polyprotein gene, complete cds	575	`....................`	594	100
EF407422.1	Hepatitis C virus isolate 6001 polyprotein gene, complete cds	578	`....................`	597	100
EF407423.1	Hepatitis C virus isolate 8028 polyprotein gene, complete cds	618	`....................`	637	100
EF407424.1	Hepatitis C virus isolate 5069 polyprotein gene, partial cds	596	`....................`	615	100
EF407425.1	Hepatitis C virus isolate 6071 polyprotein gene, complete cds	586	`....................`	605	100
EF407426.1	Hepatitis C virus isolate 8070 polyprotein genomic sequence	621	`....................`	640	100
EF407427.1	Hepatitis C virus isolate 6025 polyprotein gene, complete cds	619	`....................`	638	100
EF407428.1	Hepatitis C virus isolate 1024 polyprotein gene, complete cds	578	`....................`	597	100
EF407431.1	Hepatitis C virus isolate 3005 polyprotein gene, complete cds	570	`....................`	589	100
EF407432.1	Hepatitis C virus isolate 1013 polyprotein gene, complete cds	633	`....................`	652	100
EF407433.1	Hepatitis C virus isolate 7046 polyprotein gene, complete cds	623	`....................`	642	100
EF407434.1	Hepatitis C virus isolate 2011 polyprotein gene, complete cds	594	`....................`	613	100
EF407435.1	Hepatitis C virus isolate 5014 polyprotein gene, complete cds	589	`....................`	608	100
EF407436.1	Hepatitis C virus isolate 7040 polyprotein gene, complete cds	577	`....................`	596	100
EF407437.1	Hepatitis C virus isolate 1030 polyprotein gene, complete cds	632	`....................`	651	100
EF407438.1	Hepatitis C virus isolate 7012 polyprotein gene, complete cds	619	`....................`	638	100
EF407440.1	Hepatitis C virus isolate 7002 polyprotein gene, complete cds	620	`....................`	639	100
EF407441.1	Hepatitis C virus isolate 1036 polyprotein gene, complete cds	631	`....................`	650	100
EF407442.1	Hepatitis C virus isolate 8012 polyprotein gene, complete cds	586	`....................`	605	100
EF407443.1	Hepatitis C virus isolate 7024 polyprotein gene, complete cds	632	`....................`	651	100
EF407444.1	Hepatitis C virus isolate 6030 polyprotein gene, complete cds	593	`....................`	612	100
EF407445.1	Hepatitis C virus isolate 5009 polyprotein gene, complete cds	593	`....................`	612	100
EF407446.1	Hepatitis C virus isolate 8009 polyprotein gene, complete cds	593	`....................`	612	100
EF407448.1	Hepatitis C virus isolate 6018 polyprotein gene, partial cds	632	`....................`	651	100
EF407449.1	Hepatitis C virus isolate 2027 polyprotein gene, complete cds	632	`....................`	651	100
EF407450.1	Hepatitis C virus isolate 6020 polyprotein gene, complete cds	590	`....................`	609	100
EF407451.1	Hepatitis C virus isolate 7041 polyprotein gene, complete cds	595	`....................`	614	100
EF407452.1	Hepatitis C virus isolate 2005 polyprotein gene, complete cds	603	`....................`	622	100
EF407453.1	Hepatitis C virus isolate 4035 polyprotein gene, complete cds	619	`....................`	638	100
EF407454.1	Hepatitis C virus isolate 6031 polyprotein gene, complete cds	584	`....................`	603	100
EF407455.1	Hepatitis C virus isolate 7065 polyprotein gene, complete cds	632	`....................`	651	100
EF407456.1	Hepatitis C virus isolate 4025 polyprotein gene, complete cds	631	`....................`	650	100
EF407457.1	Hepatitis C virus isolate 1003 polyprotein gene, complete cds	476	`....................`	495	100
EF407460.1	Hepatitis C virus isolate 8007 polyprotein gene, complete cds	622	`....................`	641	100
EF407461.1	Hepatitis C virus isolate 5004 polyprotein gene, complete cds	652	`....................`	671	100
EF407465.1	Hepatitis C virus isolate 6017 polyprotein gene, complete cds	617	`....................`	636	100
EF407469.1	Hepatitis C virus isolate 4014 polyprotein gene, complete cds	616	`....................`	635	100
EF407470.1	Hepatitis C virus isolate 4064 polyprotein gene, complete cds	624	`....................`	643	100
EF407471.1	Hepatitis C virus isolate 5044 polyprotein gene, complete cds	617	`....................`	636	100
EF407472.1	Hepatitis C virus isolate 4034 polyprotein gene, complete cds	618	`....................`	637	100
EF407475.1	Hepatitis C virus isolate 3009 polyprotein gene, complete cds	604	`....................`	623	100
EF407476.1	Hepatitis C virus isolate 3012 polyprotein gene, complete cds	604	`....................`	623	100
EF407479.1	Hepatitis C virus isolate 4036 polyprotein gene, complete cds	617	`....................`	636	100
EF407480.1	Hepatitis C virus isolate 3043 polyprotein gene, complete cds	619	`....................`	638	100
EF407482.1	Hepatitis C virus isolate 6053 polyprotein gene, complete cds	557	`....................`	576	100
EF407483.1	Hepatitis C virus isolate 4043 polyprotein gene, complete cds	647	`....................`	666	100
EF407485.1	Hepatitis C virus isolate 7026 polyprotein gene, complete cds	627	`....................`	646	100
EF407487.1	Hepatitis C virus isolate 6057 polyprotein gene, complete cds	619	`....................`	638	100
EF407488.1	Hepatitis C virus isolate 8016 polyprotein gene, complete cds	616	`....................`	635	100
EF407492.1	Hepatitis C virus isolate 7025 polyprotein gene, complete cds	612	`....................`	631	100
EF407493.1	Hepatitis C virus isolate 3031 polyprotein gene, complete cds	627	`....................`	646	100
EF407497.1	Hepatitis C virus isolate 5002 polyprotein gene, complete cds	616	`....................`	635	100
EF407501.1	Hepatitis C virus isolate 7055 polyprotein gene, complete cds	645	`....................`	664	100
EF407503.1	Hepatitis C virus isolate 5083 polyprotein gene, complete cds	619	`....................`	638	100
EF407504.1	Hepatitis C virus isolate 8069 polyprotein gene, complete cds	626	`....................`	645	100
EU155241.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V71/2002, complete	568	`....................`	587	100
EU155294.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V329/2002, complet	566	`....................`	585	100
EU155345.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V221/2002, complet	580	`....................`	599	100
EU155350.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V256/2003, complet	553	`....................`	572	100
EU155379.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V29/2003, complete	568	`....................`	587	100
EU260395.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V10/2005, complete	605	`....................`	624	100
EU362876.1	Hepatitis C virus isolate 1013_FU24 polyprotein (pol) gene, complete	631	`....................`	650	100
EU362877.1	Hepatitis C virus isolate 1024_FU24 polyprotein (pol) gene, complete	577	`....................`	596	100
EU362878.1	Hepatitis C virus isolate 1030_FU24 polyprotein (pol) gene, partial c	632	`....................`	651	100
EU362879.1	Hepatitis C virus isolate 2005_FU24 polyprotein (pol) gene, partial c	631	`....................`	650	100
EU362880.1	Hepatitis C virus isolate 2011_FU24 polyprotein (pol) gene, partial c	593	`....................`	612	100
EU362881.1	Hepatitis C virus isolate 2027_FU24 polyprotein (pol) gene, partial c	633	`....................`	652	100
EU362883.1	Hepatitis C virus isolate 4025_FU24 polyprotein (pol) gene, partial c	631	`....................`	650	100
EU362884.1	Hepatitis C virus isolate 4035_FU24 polyprotein (pol) gene, complete	634	`....................`	653	100
EU362885.1	Hepatitis C virus isolate 5009_FU24 polyprotein (pol) gene, partial c	590	`....................`	609	100
EU362886.1	Hepatitis C virus isolate 5014_FU24 polyprotein (pol) gene, complete	594	`....................`	613	100
EU362887.1	Hepatitis C virus isolate 6020_FU24 polyprotein (pol) gene, complete	590	`....................`	609	100
EU362890.1	Hepatitis C virus isolate 7002_FU24 polyprotein (pol) gene, partial c	631	`....................`	650	100
EU362891.1	Hepatitis C virus isolate 7003_FU24 polyprotein (pol) gene, partial c	594	`....................`	613	100
EU362892.1	Hepatitis C virus isolate 7012_FU24 polyprotein (pol) gene, complete	617	`....................`	636	100
EU362893.1	Hepatitis C virus isolate 7040_FU24 polyprotein (pol) gene, complete	580	`....................`	599	100
EU362894.1	Hepatitis C virus isolate 7041_FU24 polyprotein (pol) gene, partial c	569	`....................`	588	100
EU362896.1	Hepatitis C virus isolate 7046_FU24 polyprotein (pol) gene, complete	631	`....................`	650	100
EU362897.1	Hepatitis C virus isolate 7065_FU24 polyprotein (pol) gene, complete	631	`....................`	650	100
EU362898.1	Hepatitis C virus isolate 8012_FU24 polyprotein (pol) gene, complete	576	`....................`	595	100
EU362899.1	Hepatitis C virus isolate 1013q polyprotein (pol) gene, partial cds	633	`....................`	652	100
EU362900.1	Hepatitis C virus isolate 1030q polyprotein (pol) gene, partial cds	632	`....................`	651	100
EU362901.1	Hepatitis C virus isolate 2011q polyprotein (pol) gene, complete cds	594	`....................`	613	100
EU362902.1	Hepatitis C virus isolate 2027q polyprotein (pol) gene, partial cds	632	`....................`	651	100
EU362903.1	Hepatitis C virus isolate 4025q polyprotein (pol) gene, partial cds	631	`....................`	650	100
EU362907.1	Hepatitis C virus isolate 7002q polyprotein (pol) gene, complete cds	620	`....................`	639	100
EU363761.1	Recombinant Hepatitis C virus H77C/JFH1, complete genome	671	`....................`	690	100
EU239713.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V316/2001, complet	620	`....................`	639	100
EU239714.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V417/2001, complet	621	`....................`	640	100
EU239715.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V423/2003, complet	598	`....................`	617	100
EU239716.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V431/2002, complet	589	`....................`	608	100
EU250017.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V508/2001, complet	589	`....................`	608	100
EU260396.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V11/2004, complete	575	`....................`	594	100
EU234061.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V126/1991, complet	620	`....................`	639	100
EU234062.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V135/1992, complet	620	`....................`	639	100
EU234063.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V177/1992, complet	593	`....................`	612	100
EU234064.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V182/1990, complet	586	`....................`	605	100
EU155213.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V101/2004, complet	601	`....................`	620	100
EU155214.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V104/2005, complet	598	`....................`	617	100
EU155215.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V105/2004, complet	567	`....................`	586	100
EU155218.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V145/2005, complet	621	`....................`	640	100
EU155219.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V146/2002, complet	620	`....................`	639	100
EU155220.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V147/2004, complet	606	`....................`	625	100
EU155221.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V148/2004, complet	620	`....................`	639	100
EU155222.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V150/2004, complet	620	`....................`	639	100
EU155223.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V151/2002, complet	620	`....................`	639	100
EU155225.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V155/2003, complet	621	`....................`	640	100
EU155226.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V156/2004, complet	620	`....................`	639	100
EU155227.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V157/2003, complet	620	`....................`	639	100
EU155228.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V158/2003, complet	620	`....................`	639	100
EU155229.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V159/2004, complet	620	`....................`	639	100
EU155231.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V163/2002, complet	620	`....................`	639	100
EU155232.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V164/2002, complet	621	`....................`	640	100
EU155233.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V445/2006, complet	599	`....................`	618	100
EU155234.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V447/2006, complet	621	`....................`	640	100
EU155235.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V449/2006, complet	620	`....................`	639	100
EU155237.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V457/2006, complet	613	`....................`	632	100
EU155238.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V465/2007, complet	598	`....................`	617	100
EU155239.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V54/2004, complete	590	`....................`	609	100
EU155240.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V68/2004, complete	590	`....................`	609	100
EU155242.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V73/2004, complete	589	`....................`	608	100
EU155243.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V86/2005, complete	567	`....................`	586	100
EU155244.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V90/2005, complete	613	`....................`	632	100
EU155245.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V91/2003, complete	590	`....................`	609	100
EU155246.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V93/2003, complete	591	`....................`	610	100
EU482831.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V25/2003, complete	578	`....................`	597	100
EU482833.1	Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V503/2003, complet	620	`....................`	639	100
EU482834.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V422/2002, complet	554	`....................`	573	100
EU482836.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V506/2002, complet	603	`....................`	622	100
EU482837.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V17/2004, complete	589	`....................`	608	100
EU482838.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V361/2006, complet	604	`....................`	623	100
EU482839.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V370/2006, complet	620	`....................`	639	100
EU482840.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V386/2004, complet	610	`....................`	629	100
EU482841.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V387/2004, complet	605	`....................`	624	100
EU482842.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V389/2006, complet	577	`....................`	596	100
EU482843.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V435/2005, complet	599	`....................`	618	100
EU482844.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V436/2006, complet	606	`....................`	625	100
EU482845.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V438/2006, complet	605	`....................`	624	100
EU482846.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V439/2000, complet	602	`....................`	621	100
EU482846.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V439/2000, complet	2638	`_______............_`	2627	60
EU482847.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V5/2004, complete	589	`....................`	608	100
EU482848.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V9/2005, complete	574	`....................`	593	100
EU482849.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V138/1989, complet	620	`....................`	639	100
EU482850.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V186/1990, complet	567	`....................`	586	100
EU482852.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V217/1989, complet	589	`....................`	608	100
EU482853.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V227/2005, complet	591	`....................`	610	100
EU482856.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V250/2002, complet	590	`....................`	609	100
EU482857.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V263/2005, complet	589	`....................`	608	100
EU482858.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V271/2006, complet	596	`....................`	615	100
EU482859.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V272/2003, complet	620	`....................`	639	100
EU482860.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V302/2003, complet	620	`....................`	639	100
EU482861.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V446/2006, complet	598	`....................`	617	100
EU482862.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V454/2006, complet	598	`....................`	617	100
EU482863.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V456/2006, complet	602	`....................`	621	100
EU482864.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V459/2006, complet	605	`....................`	624	100
EU482865.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V46/2003, complete	578	`....................`	597	100
EU482866.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V460/2006, complet	605	`....................`	624	100
EU482868.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V69/2002, complete	589	`....................`	608	100
EU482870.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V75/2004, complete	613	`....................`	632	100
EU482872.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V261/2004, complet	598	`....................`	617	100
EU482873.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V28/2003, complete	583	`....................`	602	100
EU482874.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V287/2005, complet	620	`....................`	639	100
EU482875.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V310/2005, complet	620	`....................`	639	100
EU482876.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V330/2002, complet	598	`....................`	617	100
EU482877.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V342/2001, complet	620	`....................`	639	100
EU482878.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V19/2004, complete	598	`....................`	617	100
EU482879.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V372/2006, complet	620	`....................`	639	100
EU482880.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V373/2006, complet	620	`....................`	639	100
EU482881.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V383/2003, complet	620	`....................`	639	100
EU482882.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V410/2006, complet	582	`....................`	601	100
EU482883.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V153/2005, complet	620	`....................`	639	100
EU482884.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V38/2004, complete	356	`....................`	375	100
EU482885.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V448/2006, complet	620	`....................`	639	100
EU482886.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V458/2006, complet	621	`....................`	640	100
EU482887.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V66/2002, complete	567	`....................`	586	100
EU482888.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V123/1992, complet	620	`....................`	639	100
EU482889.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V179/1990, complet	599	`....................`	618	100
EU155247.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1/2005, complete	596	`....................`	615	100
EU155248.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V336/2006, complet	590	`....................`	609	100
EU155249.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V337/2006, complet	589	`....................`	608	100
EU155250.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V358/2006, complet	597	`....................`	616	100
EU155251.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V359/2006, complet	583	`....................`	602	100
EU155252.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V362/2006, complet	589	`....................`	608	100
EU155253.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V363/2006, complet	620	`....................`	639	100
EU155254.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V365/2006, complet	621	`....................`	640	100
EU155255.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V366/2006, complet	620	`....................`	639	100
EU155256.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V367/2006, complet	620	`....................`	639	100
EU155257.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V369/2006, complet	620	`....................`	639	100
EU155257.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V369/2006, complet	1720	`_..g............____`	1706	70
EU155258.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V371/2006, complet	620	`....................`	639	100
EU155259.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V374/2006, complet	620	`....................`	639	100
EU155260.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V375/2006, complet	620	`....................`	639	100
EU155262.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V381/2001, complet	620	`....................`	639	100
EU155263.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V384/2005, complet	620	`....................`	639	100
EU155264.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V385/2006, complet	598	`....................`	617	100
EU155265.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V388/2005, complet	592	`....................`	611	100
EU155268.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V396/2006, complet	567	`....................`	586	100
EU155269.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V398/2006, complet	591	`....................`	610	100
EU155270.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V399/2006, complet	589	`....................`	608	100
EU155272.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V404/2006, complet	568	`....................`	587	100
EU155273.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V406/2006, complet	541	`....................`	560	100
EU155274.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V407/2006, complet	543	`....................`	562	100
EU155275.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V409/2006, complet	592	`....................`	611	100
EU155276.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V432/2002, complet	591	`....................`	610	100
EU155278.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V437/2006, complet	582	`....................`	601	100
EU155279.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V441/2001, complet	620	`....................`	639	100
EU155280.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V442/2001, complet	620	`....................`	639	100
EU155281.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V512/2005, complet	620	`....................`	639	100
EU155282.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V696/2006, complet	589	`....................`	608	100
EU155283.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V698/2006, complet	605	`....................`	624	100
EU155285.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V318/2001, complet	580	`....................`	599	100
EU155286.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V319/2001, complet	567	`....................`	586	100
EU155287.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V320/2001, complet	627	`....................`	646	100
EU155288.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V322/2002, complet	589	`....................`	608	100
EU155289.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V323/2001, complet	598	`....................`	617	100
EU155290.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V325/2001, complet	577	`....................`	596	100
EU155291.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V326/2002, complet	591	`....................`	610	100
EU155292.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V327/2001, complet	599	`....................`	618	100
EU155293.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V328/2001, complet	542	`....................`	561	100
EU155295.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V331/2002, complet	591	`....................`	610	100
EU155296.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V332/2002, complet	588	`....................`	607	100
EU155297.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V333/2002, complet	588	`....................`	607	100
EU155298.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V334/2002, complet	602	`....................`	621	100
EU155299.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V335/2003, complet	588	`....................`	607	100
EU155300.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V341/2003, complet	619	`....................`	638	100
EU155301.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V344/2001, complet	620	`....................`	639	100
EU155302.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V345/2001, complet	620	`....................`	639	100
EU155303.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V346/2001, complet	620	`....................`	639	100
EU155304.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V347/2003, complet	349	`....................`	368	100
EU155305.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V350/2002, complet	620	`....................`	639	100
EU155306.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V352/2002, complet	620	`....................`	639	100
EU155307.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V353/2002, complet	621	`....................`	640	100
EU155308.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V354/2003, complet	620	`....................`	639	100
EU155309.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V356/2003, complet	587	`....................`	606	100
EU155310.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V357/2004, complet	587	`....................`	606	100
EU155311.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V411/2003, complet	598	`....................`	617	100
EU155312.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V412/2000, complet	580	`....................`	599	100
EU155313.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V413/2003, complet	580	`....................`	599	100
EU155314.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V414/2004, complet	546	`....................`	565	100
EU155315.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V416/2001, complet	620	`....................`	639	100
EU155317.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V420/2002, complet	620	`....................`	639	100
EU155318.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V421/2005, complet	620	`....................`	639	100
EU155319.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V424/2002, complet	550	`....................`	569	100
EU155321.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V426/2001, complet	546	`....................`	565	100
EU155322.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V428/2001, complet	586	`....................`	605	100
EU155324.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V121/1992, complet	620	`....................`	639	100
EU155325.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V122/1991, complet	620	`....................`	639	100
EU155326.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V124/1992, complet	620	`....................`	639	100
EU155327.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V125/1992, complet	613	`....................`	632	100
EU155328.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V127/1992, complet	620	`....................`	639	100
EU155329.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V128/1992, complet	620	`....................`	639	100
EU155330.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V130/1994, complet	642	`....................`	661	100
EU155331.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V131/1990, complet	620	`....................`	639	100
EU155332.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V132/1996, complet	620	`....................`	639	100
EU155333.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V133/1989, complet	609	`....................`	628	100
EU155334.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V134/1990, complet	620	`....................`	639	100
EU155335.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V136/1992, complet	620	`....................`	639	100
EU155336.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V139/1992, complet	620	`....................`	639	100
EU155337.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V141/1990, complet	620	`....................`	639	100
EU155338.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V169/1996, complet	590	`....................`	609	100
EU155339.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V172/1990, complet	567	`....................`	586	100
EU155340.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V185/1991, complet	567	`....................`	586	100
EU155341.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V192/1992, complet	600	`....................`	619	100
EU155342.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V197/1989, complet	567	`....................`	586	100
EU155343.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V214/1996, complet	591	`....................`	610	100
EU155344.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V216/1990, complet	578	`....................`	597	100
EU155346.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V236/2005, complet	594	`....................`	613	100
EU155348.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V240/2005, complet	581	`....................`	600	100
EU155351.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V257/2003, complet	593	`....................`	612	100
EU155352.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V262/2004, complet	598	`....................`	617	100
EU155353.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V267/2005, complet	590	`....................`	609	100
EU155354.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V269/2005, complet	597	`....................`	616	100
EU155355.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V270/2006, complet	596	`....................`	615	100
EU155356.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V273/2003, complet	620	`....................`	639	100
EU155357.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V275/2003, complet	620	`....................`	639	100
EU155358.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V276/2004, complet	620	`....................`	639	100
EU155359.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V277/2002, complet	621	`....................`	640	100
EU155360.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V278/2003, complet	620	`....................`	639	100
EU155361.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V281/2004, complet	620	`....................`	639	100
EU155362.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V282/2004, complet	620	`....................`	639	100
EU155363.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V285/2005, complet	620	`....................`	639	100
EU155364.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V288/2006, complet	620	`....................`	639	100
EU155365.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V289/2006, complet	620	`....................`	639	100
EU155366.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V294/2002, complet	620	`....................`	639	100
EU155367.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V295/2002, complet	620	`....................`	639	100
EU155368.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V296/2001, complet	620	`....................`	639	100
EU155369.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V297/2002, complet	620	`....................`	639	100
EU155372.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V306/2004, complet	620	`....................`	639	100
EU155373.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V307/2005, complet	620	`....................`	639	100
EU155375.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V309/2006, complet	620	`....................`	639	100
EU155376.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V311/2006, complet	620	`....................`	639	100
EU155377.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V313/2006, complet	620	`....................`	639	100
EU155378.2	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V26/2003, complete	529	`....................`	548	100
EU155380.2	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V35/2004, complete	577	`....................`	596	100
EU155381.2	Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V502/2004, complet	620	`....................`	639	100
EU155382.2	Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V504/2003, complet	620	`....................`	639	100
EU234065.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V212/1990, complet	567	`....................`	586	100
AB426117.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima	672	`....................`	691	100
EU529676.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V39/2004, complete	604	`....................`	623	100
EU529677.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V52/2006, complete	600	`....................`	619	100
EU529678.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V63/2005, complete	586	`....................`	605	100
EU529679.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V76/2002, complete	585	`....................`	604	100
EU529680.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V80/2002, complete	603	`....................`	622	100
EU529681.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V251/2005, complet	588	`....................`	607	100
EU529682.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V291/2002, complet	338	`....................`	357	100
EU569722.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V215/1989, complet	606	`....................`	625	100
EU569723.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V13/2005, complete	591	`....................`	610	100
EU595697.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V507/2001, complet	588	`....................`	607	100
EU595698.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V44/2001, complete	589	`....................`	608	100
EU595699.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V78/2001, complete	581	`....................`	600	100
AB435162.2	Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima	672	`....................`	691	100
EU660383.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V100/2004, complet	598	`....................`	617	100
EU660384.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V55/2005, complete	620	`....................`	639	100
EU660385.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V258/2003, complet	581	`....................`	600	100
EU660386.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V355/2006, complet	620	`....................`	639	100
EU660387.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V701/2003, complet	589	`....................`	608	100
EU687193.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1562/2005, comple	567	`....................`	586	100
EU687194.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1563/2004, comple	599	`....................`	618	100
EU687195.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V1564/2007, comple	606	`....................`	625	100
AB429050.1	Hepatitis C virus gene for polyprotein, complete cds, isolate: AH1	672	`....................`	691	100
EU255927.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V222/2003, complet	593	`....................`	612	100
EU255929.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V233/2004, complet	598	`....................`	617	100
EU255930.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V237/2005, complet	598	`....................`	617	100
EU255931.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V108/2003, complet	598	`....................`	617	100
EU255932.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V111/2005, complet	598	`....................`	617	100
EU255933.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V112/2003, complet	580	`....................`	599	100
EU255934.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V453/2006, complet	606	`....................`	625	100
EU255935.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V462/2007, complet	602	`....................`	621	100
EU255936.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V510/2006, complet	599	`....................`	618	100
EU255938.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V88/2003, complete	604	`....................`	623	100
EU255939.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V408/2006, complet	591	`....................`	610	100
EU255940.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V433/2006, complet	605	`....................`	624	100
EU255941.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V697/2006, complet	604	`....................`	623	100
EU255942.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V699/2007, complet	604	`....................`	623	100
EU255943.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V223/2003, complet	591	`....................`	610	100
EU255944.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V224/2003, complet	574	`....................`	593	100
EU255945.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V225/2004, complet	591	`....................`	610	100
EU255946.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V226/2005, complet	599	`....................`	618	100
EU255947.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V228/2006, complet	605	`....................`	624	100
EU255948.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V230/2003, complet	600	`....................`	619	100
EU255950.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V241/2005, complet	590	`....................`	609	100
EU255951.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V245/2005, complet	604	`....................`	623	100
EU255953.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V248/2006, complet	595	`....................`	614	100
EU255954.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V252/2002, complet	597	`....................`	616	100
EU255955.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V254/2002, complet	581	`....................`	600	100
EU255956.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V259/2003, complet	599	`....................`	618	100
EU255958.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V265/2005, complet	598	`....................`	617	100
EU255959.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V268/2003, complet	565	`....................`	584	100
EU255960.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V312/2006, complet	620	`....................`	639	100
EU256059.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V220/2005, complet	620	`....................`	639	100
EU256060.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V360/2006, complet	592	`....................`	611	100
EU256061.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V364/2006, complet	620	`....................`	639	100
EU256064.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V376/2006, complet	620	`....................`	639	100
EU256066.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V382/2003, complet	621	`....................`	640	100
EU256067.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V402/2006, complet	599	`....................`	618	100
EU256068.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V405/2006, complet	592	`....................`	611	100
EU256086.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V110/2003, complet	570	`....................`	589	100
EU256087.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V114/2001, complet	567	`....................`	586	100
EU256088.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V149/2003, complet	620	`....................`	639	100
EU256089.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V161/2002, complet	620	`....................`	639	100
EU256090.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V162/2002, complet	620	`....................`	639	100
EU256091.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V455/2006, complet	338	`....................`	357	100
EU256092.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V463/2006, complet	620	`....................`	639	100
EU256094.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V74/2004, complete	599	`....................`	618	100
EU256095.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V81/2002, complete	602	`....................`	621	100
EU256096.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V321/2001, complet	592	`....................`	611	100
EU256097.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V324/2001, complet	598	`....................`	617	100
EU256098.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V343/2002, complet	620	`....................`	639	100
EU256099.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V348/2002, complet	620	`....................`	639	100
EU256100.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V349/2002, complet	620	`....................`	639	100
EU256101.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V351/2002, complet	620	`....................`	639	100
EU256102.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V415/2001, complet	620	`....................`	639	100
EU256103.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V418/2001, complet	620	`....................`	639	100
EU256104.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V430/2005, complet	589	`....................`	608	100
EU256105.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V505/2001, complet	622	`....................`	641	100
EU256106.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V32/2004, complete	590	`....................`	609	100
EU256107.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V36/2004, complete	599	`....................`	618	100
EU155347.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V239/2005, complet	583	`....................`	602	100
EU255993.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V102/2004, complet	598	`....................`	617	100
EU255994.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V103/2005, complet	582	`....................`	601	100
EU255995.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V106/2004, complet	597	`....................`	616	100
EU255997.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V109/2003, complet	569	`....................`	588	100
EU255998.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V113/2001, complet	599	`....................`	618	100
EU256000.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V143/2003, complet	620	`....................`	639	100
EU256001.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V144/2002, complet	620	`....................`	639	100
EU256002.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V41/2006, complete	613	`....................`	632	100
EU256003.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V444/2006, complet	605	`....................`	624	100
EU256004.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V45/2005, complete	579	`....................`	598	100
EU256005.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V451/2006, complet	600	`....................`	619	100
EU256006.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V452/2006, complet	606	`....................`	625	100
EU256007.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V464/2006, complet	588	`....................`	607	100
EU256008.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V47/2002, complete	567	`....................`	586	100
EU256009.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V49/2004, complete	585	`....................`	604	100
EU256010.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V50/2002, complete	567	`....................`	586	100
EU256011.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V51/2004, complete	567	`....................`	586	100
EU256012.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V511/2006, complet	606	`....................`	625	100
EU256013.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V53/2004, complete	596	`....................`	615	100
EU256014.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V56/2004, complete	567	`....................`	586	100
EU256015.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V57/2004, complete	590	`....................`	609	100
EU256017.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V59/2005, complete	594	`....................`	613	100
EU256018.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V60/2002, complete	587	`....................`	606	100
EU256019.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V61/2001, complete	594	`....................`	613	100
EU256020.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V62/2003, complete	596	`....................`	615	100
EU256021.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V64/2003, complete	590	`....................`	609	100
EU256022.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V65/2003, complete	589	`....................`	608	100
EU256023.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V67/2003, complete	598	`....................`	617	100
EU256024.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V72/2006, complete	567	`....................`	586	100
EU256025.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V79/2002, complete	568	`....................`	587	100
EU256027.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V83/2003, complete	605	`....................`	624	100
EU256029.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V85/2001, complete	585	`....................`	604	100
EU256030.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V87/2002, complete	581	`....................`	600	100
EU256031.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V89/2006, complete	596	`....................`	615	100
EU256032.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V92/2003, complete	596	`....................`	615	100
EU256033.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V94/2005, complete	599	`....................`	618	100
EU256034.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V95/2006, complete	599	`....................`	618	100
EU256035.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V96/2004, complete	598	`....................`	617	100
EU256036.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V97/2004, complete	598	`....................`	617	100
EU256037.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V98/2004, complete	605	`....................`	624	100
EU256038.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V99/2004, complete	603	`....................`	622	100
EU256039.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V16/2004, complete	591	`....................`	610	100
EU256040.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V18/2004, complete	598	`....................`	617	100
EU256041.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2/2005, complete	603	`....................`	622	100
EU256043.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V3/2005, complete	567	`....................`	586	100
EU256044.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V378/2001, complet	577	`....................`	596	100
EU256045.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V380/2003, complet	620	`....................`	639	100
EU256046.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V392/2006, complet	598	`....................`	617	100
EU256047.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V393/2006, complet	598	`....................`	617	100
EU256048.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V394/2006, complet	598	`....................`	617	100
EU256050.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V397/2006, complet	599	`....................`	618	100
EU256052.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V403/2006, complet	597	`....................`	616	100
EU256054.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V443/2001, complet	620	`....................`	639	100
EU256055.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V6/2001, complete	594	`....................`	613	100
EU256056.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V7/2003, complete	569	`....................`	588	100
EU256057.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V702/2006, complet	606	`....................`	625	100
EU256058.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V8/2005, complete	584	`....................`	603	100
EU256069.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V229/2006, complet	579	`....................`	598	100
EU256070.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V232/2003, complet	591	`....................`	610	100
EU256071.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V234/2004, complet	567	`....................`	586	100
EU256072.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V238/2005, complet	579	`....................`	598	100
EU256074.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V264/2005, complet	596	`....................`	615	100
EU256075.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V279/2004, complet	620	`....................`	639	100
EU256076.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V280/2004, complet	620	`....................`	639	100
EU256077.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V283/2005, complet	620	`....................`	639	100
EU256078.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V284/2005, complet	622	`....................`	641	100
EU256079.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V286/2005, complet	621	`....................`	640	100
EU256080.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V292/2002, complet	620	`....................`	639	100
EU256081.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V293/2002, complet	620	`....................`	639	100
EU256083.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V299/2005, complet	620	`....................`	639	100
EU256085.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V305/2003, complet	620	`....................`	639	100
EU255961.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V137/1991, complet	620	`....................`	639	100
EU255962.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V140/1991, complet	338	`....................`	357	100
EU255963.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V166/1992, complet	599	`....................`	618	100
EU255964.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V167/1992, complet	582	`....................`	601	100
EU255965.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V168/1990, complet	596	`....................`	615	100
EU255966.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V170/1997, complet	603	`....................`	622	100
EU255967.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V171/1997, complet	577	`....................`	596	100
EU255968.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V173/1989, complet	582	`....................`	601	100
EU255969.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V174/1992, complet	594	`....................`	613	100
EU255970.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V176/1992, complet	590	`....................`	609	100
EU255973.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V180/1990, complet	593	`....................`	612	100
EU255974.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V181/1992, complet	596	`....................`	615	100
EU255975.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V183/1994, complet	597	`....................`	616	100
EU255976.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V184/1992, complet	593	`....................`	612	100
EU255977.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V187/1991, complet	597	`....................`	616	100
EU255978.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V188/1991, complet	586	`....................`	605	100
EU255979.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V189/1991, complet	599	`....................`	618	100
EU255980.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V190/1990, complet	590	`....................`	609	100
EU255981.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V191/1990, complet	605	`....................`	624	100
EU255983.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V195/1990, complet	591	`....................`	610	100
EU255984.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V200/1990, complet	584	`....................`	603	100
EU255985.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V201/1991, complet	601	`....................`	620	100
EU255986.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V203/1989, complet	599	`....................`	618	100
EU255987.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V205/1989, complet	580	`....................`	599	100
EU255988.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V206/1995, complet	588	`....................`	607	100
EU255989.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V208/1990, complet	605	`....................`	624	100
EU255990.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V209/1992, complet	597	`....................`	616	100
EU255991.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V210/1989, complet	587	`....................`	606	100
EU255992.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V213/1992, complet	593	`....................`	612	100
EU857431.1	Hepatitis C virus subtype 1b isolate Whu, complete genome	672	`....................`	691	100
FJ024087.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1705/2007, comple	599	`....................`	618	100
FJ024275.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1708/2007, comple	564	`....................`	583	100
FJ024276.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1710/2007, comple	564	`....................`	583	100
FJ024278.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1713/2007, comple	566	`....................`	585	100
FJ024279.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1715/2007, comple	620	`....................`	639	100
FJ024281.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1718/2007, comple	596	`....................`	615	100
FJ024282.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1719/2005, comple	584	`....................`	603	100
EU862823.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V24/2003, complete	577	`....................`	596	100
EU862824.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V31/2004, partial	589	`....................`	608	100
EU862827.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V218/1993, partial	589	`....................`	608	100
EU862835.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V509/2001, partial	620	`....................`	639	100
FJ181999.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1706/2007, comple	583	`....................`	602	100
FJ182000.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1712/2007, comple	566	`....................`	585	100
FJ182001.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1716/2007, comple	590	`....................`	609	100
FJ205867.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1709/2007, comple	620	`....................`	639	100
FJ205868.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1714/2007, comple	576	`....................`	595	100
FJ205869.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1720/2006, comple	566	`....................`	585	100
FJ390394.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1745/2008, comple	582	`....................`	601	100
FJ390395.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1747/2008, comple	559	`....................`	578	100
FJ390397.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1749/2008, comple	620	`....................`	639	100
FJ390398.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1750/2008, comple	620	`....................`	639	100
FJ390399.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1751/2007, comple	543	`....................`	562	100
FJ410172.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1746/2008, comple	566	`....................`	585	100
EU781804.1	Hepatitis C virus subtype 1a isolate 02-46, complete genome	587	`....................`	606	100
EU781823.1	Hepatitis C virus subtype 1a isolate 03-12, complete genome	595	`....................`	614	100
EU781824.1	Hepatitis C virus subtype 1a isolate DN14, complete genome	579	`....................`	598	100
FJ478453.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V2148/1999, comple	620	`....................`	639	100
AB442219.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-	672	`....................`	691	100
AB442220.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH	672	`....................`	691	100
AB442221.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH	672	`....................`	691	100
AB442222.1	Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B-	672	`....................`	691	100
GQ149768.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V2147/2002, comple	583	`....................`	602	100
FN435993.1	Hepatitis C virus subtype 1b complete genome, isolate EU1, genomic RN	673	`....................`	692	100
EU862828.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V12/2004, complete	605	`....................`	624	100
EU862831.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V400/2006, complet	590	`....................`	609	100
EU862832.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V27/2003, complete	586	`....................`	605	100
EU862834.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V37/2004, complete	517	`....................`	536	100
EU862836.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V244/2003, complet	598	`....................`	617	100
EU862837.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V304/2004, complet	621	`....................`	640	100
EU862838.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V165/1992, complet	609	`....................`	628	100
EU862839.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V175/1990, complet	600	`....................`	619	100
EU862840.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V40/2003, complete	613	`....................`	632	100
GU133617.1	Hepatitis C virus subtype 1b, complete genome	672	`....................`	691	100
AF009606.1	Hepatitis C virus subtype 1a polyprotein gene, complete cds	672	`....................`	691	100
D11168.1	HPCJTA Hepatitis C virus (HCV) complete genome	672	`...........g........`	691	95
D11355.1	HPCJTB Hepatitis C virus genomic RNA, complete genome, strain: JT'	672	`...........c........`	691	95
M96362.1	HPCUNKCDS Hepatitis C virus mRNA, complete cds	673	`.............a......`	692	95
U16362.1	HCU16362 Hepatitis C virus subtype 1b, complete genome	673	`.............a......`	692	95
D63822.1	HPCJK046E2 Hepatitis C virus (isolate JK046) genomic RNA, complete gen	669	`.................t..`	688	95
AF165063.1	Hepatitis C virus subtype 1b strain MD10-1, complete genome	660	`...........c........`	679	95
AF165064.1	Hepatitis C virus subtype 1b strain MD10-2, complete genome	660	`...........c........`	679	95
AF169002.1	Hepatitis C virus subtype 2a isolate NDM228, complete genome	671	`..........a.........`	690	95
AF169003.1	Hepatitis C virus subtype 2a isolate G2aK1, complete genome	671	`..........a.........`	690	95
AF169004.1	Hepatitis C virus subtype 2a isolate G2aK3, complete genome	671	`..........a.........`	690	95
AF169005.1	Hepatitis C virus subtype 2a isolate NDM59, complete genome	671	`..........a.........`	690	95
AF238481.1	Hepatitis C virus subtype 2a strain MD2a-1, complete genome	637	`..........a.........`	656	95
AF238482.1	Hepatitis C virus subtype 2a strain MD2a-2, complete genome	637	`..........a.........`	656	95
AF238483.1	Hepatitis C virus subtype 2a strain MD2a-4, complete genome	637	`..........a.........`	656	95
AF238484.1	Hepatitis C virus subtype 2a strain MD2a-5, complete genome	637	`..........a.........`	656	95
AF238485.1	Hepatitis C virus subtype 2a strain MD2a-7, complete genome	637	`..........a.........`	656	95
AF207769.1	Hepatitis C virus subtype 1b strain MD28, complete genome	660	`.................a..`	679	95
AB047639.1	Hepatitis C virus (isolate JFH-1) genomic RNA, complete genome	671	`..........a.........`	690	95
AB047640.1	Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-1	671	`..........a.........`	690	95
AB047643.1	Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-4	671	`..........a.........`	690	95
AB047644.1	Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-5	671	`..........a.........`	690	95
AB047645.1	Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-6	671	`..........a.........`	690	95
AY651061.1	Hepatitis C virus isolate Khaja1, complete genome	672	`..............a.....`	691	95
AY746460.1	Hepatitis C virus genotype 2a polyprotein gene, complete cds	671	`..........a.........`	690	95
AB154194.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`...........c........`	679	95
AB154200.1	Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola	660	`...........c........`	679	95
DQ314806.1	Hepatitis C virus subtype 6g isolate HK6554, complete genome	669	`.................t..`	688	95
DQ835762.1	Hepatitis C virus subtype 6i isolate C-0159, complete genome	669	`...........a........`	688	95
DQ835763.1	Hepatitis C virus subtype 6m isolate C-0208, complete genome	669	`...........a........`	688	95
DQ835765.1	Hepatitis C virus subtype 6m isolate C-0185, complete genome	669	`...........a........`	688	95
DQ835766.1	Hepatitis C virus subtype 6m isolate C-0192, complete genome	669	`...........a........`	688	95
DQ835767.1	Hepatitis C virus subtype 6m isolate B4/92, complete genome	669	`...........a........`	688	95
EF026073.1	Hepatitis C virus strain RF3 2/5 polyprotein mRNA, partial cds	649	`..........a.........`	668	95
AM408911.1	Hepatitis C virus partial gene for polyprotein, recombinant 2/5, geno	649	`..........a.........`	668	95
EF407417.1	Hepatitis C virus isolate 4040 polyprotein gene, complete cds	631	`.................a..`	650	95
EF407439.1	Hepatitis C virus isolate 8003 polyprotein gene, complete cds	617	`...........c........`	636	95
EF407502.1	Hepatitis C virus isolate 2038 polyprotein gene, complete cds	701	`...........c........`	720	95
EU362882.1	Hepatitis C virus isolate 3005_FU24 polyprotein (pol) gene, complete	591	`...........c........`	610	95
EU362895.1	Hepatitis C virus isolate 7043_FU24 polyprotein (pol) gene, complete	590	`.....t..............`	609	95
EU155216.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V115/2001, complet	592	`..............a.....`	611	95
EU155217.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V142/2004, complet	620	`...........c........`	639	95
EU155224.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V152/2003, complet	620	`...........c........`	639	95
EU155230.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V160/2002, complet	620	`...........c........`	639	95
EU155236.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V450/2006, complet	563	`.................a..`	582	95
EU482832.1	Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V33/2004, complete	582	`...........c........`	601	95
EU482835.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V427/2002, complet	605	`...........g........`	624	95
EU482854.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V242/2001, complet	589	`...........c........`	608	95
EU482855.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V249/2002, complet	583	`...........c........`	602	95
EU482867.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V461/2006, complet	605	`...........c........`	624	95
EU482869.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V70/2002, complete	589	`...........c........`	608	95
EU482871.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V77/2002, complete	581	`...........c........`	600	95
EU155261.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V379/2005, complet	621	`...........a........`	640	95
EU155266.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V390/2006, complet	541	`...........c........`	560	95
EU155267.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V391/2006, complet	578	`........a...........`	597	95
EU155271.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V401/2006, complet	594	`.....t..............`	613	95
EU155277.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V434/2003, complet	567	`...........c........`	586	95
EU155284.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V317/2001, complet	606	`.................a..`	625	95
EU155316.2	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V419/2002, complet	620	`..............a.....`	639	95
EU155320.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V425/2001, complet	543	`...........g........`	562	95
EU155323.2	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V429/2002, complet	583	`...........c........`	602	95
EU155349.2	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V246/2005, complet	579	`..............a.....`	598	95
EU155370.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V300/2005, complet	620	`...........c........`	639	95
EU155371.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V301/2005, complet	620	`...........c........`	639	95
EU155374.2	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V308/2005, complet	642	`...........c........`	661	95
EU660388.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V154/2001, complet	621	`...........c........`	640	95
EU255928.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V231/2003, complet	598	`...........c........`	617	95
EU255937.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V700/2006, complet	589	`...........c........`	608	95
EU255937.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V700/2006, complet	2625	`_______............_`	2614	60
EU255949.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V235/2005, complet	598	`.............a......`	617	95
EU255952.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V247/2005, complet	593	`...........c........`	612	95
EU255957.1	Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V260/2004, complet	620	`...........g........`	639	95
EU256062.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V368/2006, complet	620	`..........a.........`	639	95
EU256065.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V377/2006, complet	620	`...........c........`	639	95
EU255996.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V107/2003, complet	603	`...........c........`	622	95
EU255999.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V116/2002, complet	585	`...........c........`	604	95
EU256026.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V82/2002, complete	603	`.................a..`	622	95
EU256028.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V84/2001, complete	598	`...........c........`	617	95
EU256049.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V395/2006, complet	598	`...........g........`	617	95
EU256051.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V4/2005, complete	594	`...........a........`	613	95
EU256053.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V440/2001, complet	599	`...........c........`	618	95
EU256082.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V298/2005, complet	621	`...........c........`	640	95
EU256084.1	Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V303/2003, complet	620	`...........c........`	639	95
EU255982.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V194/1990, complet	596	`...........c........`	615	95
AM910652.2	Hepatitis C virus subtype 1g complete genome	644	`.................a..`	663	95
FJ024086.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1704/2007, comple	620	`...........c........`	639	95
FJ024274.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1707/2007, comple	525	`.................a..`	544	95
FJ024277.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1711/2007, comple	620	`...........c........`	639	95
FJ024280.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V1717/2007, comple	581	`........a...........`	600	95
EU862826.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V198/1989, partial	589	`...........c........`	608	95
FJ390396.1	Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V1748/2007, comple	620	`............c.......`	639	95
FJ407092.1	Hepatitis C virus isolate IND-HCV-3i, complete genome	671	`..............a.....`	690	95
FJ462431.1	Hepatitis C virus isolate QC139, complete genome	671	`..t.................`	690	95
EU862841.1	Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V48/2003, complete	587	`...........c........`	606	95
AF177036.1	Hepatitis C virus subtype 2a strain HC-J6CH clone pJ6CF, complete gen	671	`..........a.........`	690	95
EF424625.1	Hepatitis C virus subtype 6q isolate QC99, complete genome	670	`...........g.....r..`	689	90
D00944.1	HPCPOLP Hepatitis C virus genomic RNA for polyprotein, complete cds	671	`..........a......c..`	690	90
D14853.1	HPCCGS Hepatitis C virus (isolate HC-G9) genomic RNA, complete genome	672	`...........g.....a..`	691	90
X76918.1	Hepatitis C virus genes for core, envelope and NS1 proteins	629	`...........g.....c..`	648	90
D49374.1	HPCFG Hepatitis C virus (isolate Tr Kj) genomic RNA, complete genome	670	`..............a..c..`	689	90
D63821.1	HPCJK049E1 Hepatitis C virus (isolate JK049) genomic RNA, complete gen	670	`..............a..c..`	689	90
AF046866.1	Hepatitis C virus subtype 3a strain CB polyprotein gene, complete cds	670	`...........g.....c..`	689	90
AB047641.1	Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-2	671	`..........ac........`	690	90
AB047642.1	Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-3	671	`..........a..a......`	690	90
AY051292.1	Hepatitis C virus (isolate India) polyprotein mRNA, complete cds	672	`...........c.....a..`	691	90
D84263.2	Hepatitis C virus (isolate VN235) genomic RNA, complete genome	669	`...........a.....c..`	688	90
D84264.2	Hepatitis C virus (isolate VN405) genomic RNA, complete genome	669	`...........g.....a..`	688	90
D84265.2	Hepatitis C virus (isolate VN004) genomic RNA, complete genome	669	`...........a.....t..`	688	90
DQ155561.1	Hepatitis C virus (isolate D54) polyprotein gene, partial cds	644	`..........ac........`	663	90
DQ314805.1	Hepatitis C virus subtype 6e isolate GX004, complete genome	669	`...........a.....c..`	688	90
DQ278892.1	Hepatitis C virus isolate GZ52557, complete genome	670	`..............a..c..`	689	90
DQ437509.2	Hepatitis C virus isolate 452 polyprotein gene, partial cds	331	`...........g.....c..`	350	90
DQ835760.1	Hepatitis C virus subtype 6f isolate C-0044, complete genome	669	`...........g.....c..`	688	90
DQ835761.1	Hepatitis C virus subtype 6j isolate C-0667, complete genome	669	`...........a.....c..`	688	90
DQ835764.1	Hepatitis C virus subtype 6f isolate C-0046, complete genome	669	`...........g.....c..`	688	90
DQ835768.1	Hepatitis C virus subtype 6n isolate D86/93, complete genome	669	`...........ac.......`	688	90
DQ835769.1	Hepatitis C virus subtype 6j isolate Th553, complete genome	669	`...........a.....c..`	688	90
DQ835770.1	Hepatitis C virus subtype 6i isolate Th602, complete genome	669	`...........a.....a..`	688	90
DQ988075.1	Hepatitis C virus isolate Eg4 polyprotein gene, partial cds	590	`...........a.....c..`	609	90
DQ988078.1	Hepatitis C virus isolate Eg10 polyprotein gene, partial cds	586	`...........g.....c..`	605	90
EF424626.1	Hepatitis C virus subtype 6p isolate QC216, complete genome	670	`...........g.....c..`	689	90
EF424627.1	Hepatitis C virus subtype 6o isolate QC227, complete genome	669	`...........a.....c..`	688	90
EF424628.1	Hepatitis C virus subtype 6l isolate 537796, complete genome	669	`...........a.....c..`	688	90
EF407447.1	Hepatitis C virus isolate 8004 polyprotein gene, complete cds	632	`...........c.....a..`	651	90
EF632069.1	Hepatitis C virus isolate TV241, complete genome	669	`...........g.....t..`	688	90
EF632070.1	Hepatitis C virus isolate TV249, complete genome	669	`...........g.....t..`	688	90
EF632071.1	Hepatitis C virus isolate VT21, complete genome	655	`...........g.....c..`	674	90
EU246933.1	Hepatitis C virus strain D33 polyprotein gene, complete cds	644	`...........a.....c..`	663	90
EU246935.1	Hepatitis C virus strain TH24 polyprotein gene, complete cds	610	`...........a.....a..`	629	90
EU408326.1	Hepatitis C virus isolate 537798 polyprotein precursor, gene, complet	669	`...........a.....c..`	688	90
EU158186.1	Hepatitis C virus isolate NK46, complete genome	638	`...........a.....a..`	657	90
EU798760.1	Hepatitis C virus subtype 6v isolate KMN-02 polyprotein precursor, ge	669	`...........a.....a..`	688	90
EU798761.1	Hepatitis C virus subtype 6v isolate KM046 polyprotein precursor, gen	638	`...........a.....a..`	657	90
FJ025854.1	Hepatitis C virus strain P026 polyprotein gene, complete cds	521	`..t..............c..`	540	90
FJ025856.1	Hepatitis C virus strain P245 polyprotein gene, complete cds	521	`..t..............c..`	540	90
FJ025856.1	Hepatitis C virus strain P245 polyprotein gene, complete cds	1975	`_______............_`	1964	60
FJ435090.1	Hepatitis C virus isolate KM181 genotype 6v, complete genome	669	`...........a.....a..`	688	90
FJ462435.1	Hepatitis C virus isolate QC264, complete genome	671	`..t..............c..`	690	90
FJ462435.1	Hepatitis C virus isolate QC264, complete genome	2131	`_..a..t..t........._`	2114	75
AB520610.1	Hepatitis C virus subtype 1a genomic RNA, complete genome, strain: HC	672	`...........c.....a..`	691	90
D84262.2	Hepatitis C virus (isolate Th580) genomic RNA, complete genome GCCAGC	673	`............c....c..`	692	90
D17763.1	HPCEGS Hepatitis C virus (isolate NZL1) genomic RNA, complete genome	670	`...........g.....c..`	689	90
FJ025855.1	Hepatitis C virus strain P212 polyprotein gene, complete cds	521	`..t...........r..c..`	540	85
FJ025855.1	Hepatitis C virus strain P212 polyprotein gene, complete cds	1975	`_______............_`	1964	60
D10988.1	HPCJ8G Hepatitis C virus genome	672	`..........a...a..a..`	691	85
D28917.1	HPCK3A Hepatitis C virus (isolate HCV-K3a/650) genomic RNA, complete g	670	`...........ac....c..`	689	85
D50409.1	Hepatitis C virus (isolate BEBE1) genomic RNA, complete genome	671	`..........a..aa.....`	690	85
Y12083.1	Hepatitis C virus genotype 6a RNA for HCV polyprotein	614	`............c.a..c..`	633	85
AF064490.1	Hepatitis C virus (isolate SA13) polyprotein gene, complete cds	577	`...........g.aa.....`	596	85
AB031663.1	Hepatitis C virus (isolate VAT96) genomic RNA, complete genome	672	`..........a...a..a..`	691	85
AF238486.1	Hepatitis C virus subtype 2b strain MD2b-1, complete genome	635	`..........a...a..a..`	654	85
AB030907.1	Hepatitis C virus (isolate JPUT971017) genomic RNA, complete genome	672	`..........a...a..a..`	691	85
AY232732.1	Hepatitis C virus clone MD2b2-1 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232733.1	Hepatitis C virus clone MD2b2-2 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232738.1	Hepatitis C virus clone MD2b5-1 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232739.1	Hepatitis C virus clone MD2b5-2 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232742.1	Hepatitis C virus clone MD2b7-1 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232743.1	Hepatitis C virus clone MD2b7-2 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232744.1	Hepatitis C virus clone MD2b8-1 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232745.1	Hepatitis C virus clone MD2b8-2 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232746.1	Hepatitis C virus clone MD2b9-1 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY232747.1	Hepatitis C virus clone MD2b9-2 polyprotein mRNA, complete cds	635	`..........a...a..a..`	654	85
AY587845.1	Hepatitis C virus strain RF1_2k/1b, N687 polyprotein gene, complete c	599	`..........a...a..a..`	618	85
AY859526.1	Hepatitis C virus (isolate 6a33), complete genome	626	`............c.a..c..`	645	85
AY878650.1	Hepatitis C virus subtype 6k isolate KM45, complete genome	655	`...........a..a..c..`	674	85
AY878651.1	Hepatitis C virus subtype 6k isolate KM41, complete genome	640	`...........a..a..c..`	659	85
AY878652.1	Hepatitis C virus subtype 6n isolate KM42, complete genome	639	`...........ac.a.....`	658	85
DQ278891.1	Hepatitis C virus subtype 6k isolate KM45, complete genome	671	`...........a..a..c..`	690	85
DQ278893.1	Hepatitis C virus subtype 6k isolate KM41, complete genome	672	`...........a..a..c..`	691	85
DQ278894.1	Hepatitis C virus subtype 6n isolate KM42, complete genome	673	`...........ac.a.....`	692	85
DQ480512.1	Hepatitis C virus subtype 6a strain 6a77, complete genome	629	`............c.a..c..`	648	85
DQ480513.1	Hepatitis C virus subtype 6a strain 6a35, complete genome	629	`............c.a..c..`	648	85
DQ480514.1	Hepatitis C virus subtype 6a strain 6a63, complete genome	629	`............c.a..c..`	648	85
DQ480515.1	Hepatitis C virus subtype 6a strain 6a64, complete genome	629	`............c.a..c..`	648	85
DQ480516.1	Hepatitis C virus subtype 6a strain 6a61, complete genome	629	`............c.a..c..`	648	85
DQ480517.1	Hepatitis C virus subtype 6a strain 6a73, complete genome	629	`............c.a..c..`	648	85
DQ480518.1	Hepatitis C virus subtype 6a strain 6a65, complete genome	629	`............c.a..c..`	648	85
DQ480519.1	Hepatitis C virus subtype 6a strain 6a66, complete genome	629	`............c.a..c..`	648	85
DQ480520.1	Hepatitis C virus subtype 6a strain 6a67, complete genome	629	`............c.a..c..`	648	85
DQ480521.1	Hepatitis C virus subtype 6a strain 6a69, complete genome	629	`............c.a..c..`	648	85
DQ480522.1	Hepatitis C virus subtype 6a strain 6a72, complete genome	629	`............c.a..c..`	648	85
DQ480523.1	Hepatitis C virus subtype 6a strain 6a62, complete genome	629	`............c.a..c..`	648	85
DQ480524.1	Hepatitis C virus subtype 6a strain 6a74, complete genome	629	`............c.a..c..`	648	85
EF424629.1	Hepatitis C virus subtype 6c isolate Th846, complete genome	670	`...........a..a..c..`	689	85
EU246930.1	Hepatitis C virus strain D9 polyprotein gene, complete cds	647	`............c.a..c..`	666	85
EU246939.1	Hepatitis C virus strain D49 polyprotein gene, complete cds	644	`...........g..a..c..`	663	85
EU643834.1	Hepatitis C virus isolate HCV-6-D140 polyprotein gene, complete cds	396	`...........c..a..c..`	415	85
EU643835.1	Hepatitis C virus isolate HCV-6-D177 polyprotein gene, complete cds	396	`..........a...a..a..`	415	85
EU643836.1	Hepatitis C virus isolate HCV-6-D370 polyprotein gene, complete cds	396	`...........c..a..c..`	415	85
FJ821465.1	Hepatitis C virus strain M21-2k/1b, complete genome	646	`..........a...a..a..`	665	85
GQ275355.1	Hepatitis C virus subtype 3a, complete genome	670	`...........a..a..c..`	689	85
AB559564.1	Hepatitis C virus HCV gene for hepatitis C virus polyprotein, complet	672	`..........a...a..a..`	691	85
HM777359.1	Hepatitis C virus isolate C1292 genotype 2j, complete genome	591	`..........a...a..a..`	610	85
FN666428.2	Hepatitis C virus gene for polyprotein, genomic RNA, subtype 2q, isol	644	`..........ac.....a..`	663	85
AY232730.1	Hepatitis C virus clone MD2b1-1 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232731.1	Hepatitis C virus clone MD2b1-2 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232734.1	Hepatitis C virus clone MD2b3-1 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232735.1	Hepatitis C virus clone MD2b3-2 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232736.1	Hepatitis C virus clone MD2b4-1 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232737.1	Hepatitis C virus clone MD2b4-2 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232740.1	Hepatitis C virus clone MD2b6-1 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232741.1	Hepatitis C virus clone MD2b6-2 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232748.1	Hepatitis C virus clone MD2b10-1 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80
AY232749.1	Hepatitis C virus clone MD2b10-2 polyprotein mRNA, complete cds	635	`..........ac..a..a..`	654	80

VIRsiRNAdb

Database of Viral siRNA / shRNA