../../tmp/servers/virsirnadb/134246178
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2348 | 1 | gacgacctggttacggaaa | 19 | |
| GU734771.1 | Human herpesvirus 1 strain F, complete genome | 90100 | ................... | 90118 | 100 |
| GU734771.1 | Human herpesvirus 1 strain F, complete genome | 31110 | ..........gg.....__ | 31094 | 78 |
| GU734771.1 | Human herpesvirus 1 strain F, complete genome | 113721 | ..........aat....c. | 113739 | 78 |
| GU734772.1 | Human herpesvirus 1 strain H129, complete genome | 90140 | ................... | 90158 | 100 |
| GU734772.1 | Human herpesvirus 1 strain H129, complete genome | 31144 | ..........gg.....__ | 31128 | 78 |
| GU734772.1 | Human herpesvirus 1 strain H129, complete genome | 113770 | ..........aat....c. | 113788 | 78 |
| NC_001806.1 | Human herpesvirus 1, complete genome | 90205 | ................... | 90223 | 100 |
| NC_001806.1 | Human herpesvirus 1, complete genome | 31190 | ..........gg.....__ | 31174 | 78 |
| NC_001806.1 | Human herpesvirus 1, complete genome | 113830 | ..........aat....c. | 113848 | 78 |
| Z86099.2 | Herpes simplex virus type 2 (strain HG52), complete genome | 90775 | ...........g....... | 90793 | 94 |
| NC_001798.1 | Human herpesvirus 2, complete genome | 90775 | ...........g....... | 90793 | 94 |
| NC_006273.2 | Human herpesvirus 5, complete genome | 219548 | .t....g..........__ | 219564 | 78 |
| NC_006273.2 | Human herpesvirus 5, complete genome | 51964 | ...........g.t..___ | 51949 | 73 |
| NC_006273.2 | Human herpesvirus 5, complete genome | 124468 | .........t.cg....__ | 124484 | 73 |
| NC_007605.1 | Human herpesvirus 4 type 1, complete genome | 93523 | ..g..........aa..._ | 93506 | 78 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 93441 | ..g..........aa..._ | 93424 | 78 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 94353 | ..g..........aa..._ | 94336 | 78 |
| GQ994935.1 | Human herpesvirus 8 clone 219BAC, complete genome | 127292 | ..a...g.........___ | 127307 | 73 |
| NC_009333.1 | Human herpesvirus 8, complete genome | 127115 | ..a...g.........___ | 127130 | 73 |
| HQ380895.1 | Human herpesvirus 5 strain JHC, complete genome | 51721 | ...........g.t..___ | 51706 | 73 |
| HQ380895.1 | Human herpesvirus 5 strain JHC, complete genome | 27437 | _...t..........____ | 27424 | 68 |
| HQ380895.1 | Human herpesvirus 5 strain JHC, complete genome | 67140 | _____.a............ | 67127 | 68 |
| HQ380895.1 | Human herpesvirus 5 strain JHC, complete genome | 124205 | .........t.cg....__ | 124221 | 73 |
| U43400.1 | HHU43400 Human herpesvirus-7 (HHV7) JI, complete virion genome | 65659 | _____..........t... | 65672 | 68 |
| NC_001716.2 | Human herpesvirus 7, complete genome | 69883 | _____..........t... | 69896 | 68 |