../../tmp/servers/virsirnadb/144484540
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1435 | 1 | gatgaattgcttgacgctg | 19 | |
| NC_004281.1 | Mammalian orthoreovirus 3 segment M3, complete sequence | 1753 | ................... | 1771 | 100 |
| AF174384.1 | Reovirus 3 major nonstructural protein mu-NS gene, complete cds | 1756 | ................... | 1774 | 100 |
| EF494440.1 | Mammalian orthoreovirus 3 strain T3D segment M3, complete sequence | 1756 | ................... | 1774 | 100 |
| GU589582.1 | Mammalian orthoreovirus 3 strain Abney segment M3, complete sequence | 1756 | ................... | 1774 | 100 |
| HM159618.1 | Mammalian orthoreovirus 3 Dearing strain T3D segment M3, complete seq | 1756 | ................... | 1774 | 100 |
| GU991664.1 | Mammalian orthoreovirus 3 isolate R124 segment M3, complete sequence | 1756 | ................... | 1774 | 100 |
| GU991674.1 | Mammalian orthoreovirus 3 isolate Q2R segment M3, complete sequence | 1756 | ................... | 1774 | 100 |
| NC_004281.1 | Mammalian orthoreovirus 3 segment M3, complete sequence | 1753 | ................... | 1771 | 100 |
| DQ664189.1 | Mammalian orthoreovirus 2 isolate BYD1 segment M3, complete sequence | 1756 | ..c..gc..........c. | 1774 | 78 |
| DQ664189.1 | Mammalian orthoreovirus 2 isolate BYD1 segment M3, complete sequence | 2173 | .........__________ | 2181 | 47 |
| DQ664189.1 | Mammalian orthoreovirus 2 isolate BYD1 segment M3, complete sequence | 2241 | .........__________ | 2233 | 47 |
| AY428872.1 | Mammalian orthoreovirus 1 strain Netherlands 84 minor core protein mu | 1609 | __.........ga....__ | 1623 | 68 |
| NC_004282.4 | Mammalian orthoreovirus 3 segment L1, complete sequence | 322 | .t.........g.._____ | 335 | 63 |
| NC_013226.1 | Mammalian orthoreovirus 3 segment L2, complete genome | 2416 | _______.........a.. | 2427 | 57 |
| NC_013228.1 | Mammalian orthoreovirus 3 segment M2, complete genome | 248 | .........tc..______ | 236 | 57 |
| NC_004278.1 | Mammalian orthoreovirus 3 segment M2, complete sequence | 278 | .........tc..______ | 266 | 57 |
| NC_004278.1 | Mammalian orthoreovirus 3 segment M2, complete sequence | 278 | .........tc..______ | 266 | 57 |
| M20161.1 | REO3OCPMUA Reovirus type 3 Dearing outer capsid protein (mu-1) RNA, co | 277 | .........tc..______ | 265 | 57 |
| U24260.1 | RSU24260 Reovirus type 3 (M2) mRNA, complete cds | 277 | .........tc..______ | 265 | 57 |
| AF368034.1 | Ndelle virus segment M2, complete sequence | 277 | .........tc..______ | 265 | 57 |
| DQ482462.1 | Mammalian orthoreovirus isolate SC-A segment M2, complete sequence | 277 | .........tc..______ | 265 | 57 |
| DQ664188.1 | Mammalian orthoreovirus 2 isolate BYD1 segment M2, complete sequence | 277 | .........tc..______ | 265 | 57 |
| EF494439.1 | Mammalian orthoreovirus 3 strain T3D segment M2, complete sequence | 277 | .........tc..______ | 265 | 57 |
| GU589581.1 | Mammalian orthoreovirus 3 strain Abney segment M2, complete sequence | 278 | .........tc..______ | 266 | 57 |
| HM159617.1 | Mammalian orthoreovirus 3 Dearing strain T3D segment M2, complete seq | 278 | .........tc..______ | 266 | 57 |
| GU991663.1 | Mammalian orthoreovirus 3 isolate R124 segment M2, complete sequence | 277 | .........tc..______ | 265 | 57 |
| GU991673.1 | Mammalian orthoreovirus 3 isolate Q2R segment M2, complete sequence | 277 | .........tc..______ | 265 | 57 |
| HQ642773.1 | Mammalian orthoreovirus strain MRV-HLJ/2007 mu-1 protein gene, comple | 269 | .........tc..______ | 257 | 57 |
| NC_004275.1 | Mammalian orthoreovirus 3 segment L2, complete sequence | 2721 | __________......... | 2729 | 47 |
| DQ664186.1 | Mammalian orthoreovirus 2 isolate BYD1 segment L3, complete sequence | 3901 | .........__________ | 3893 | 47 |